RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CCDC24Q8N4L8 307 aa22.31■■□□□ 1.16
CCM2-214ENST00000481194 MAGEC2Q9UBF1 373 aaPredicted RBP22.31■■□□□ 1.16
CCM2-214ENST00000481194 PPP2R5BQ15173 497 aa22.31■■□□□ 1.16
CCM2-214ENST00000481194 MARCH10Q8NA82 808 aaPredicted RBP22.31■■□□□ 1.16
CCM2-214ENST00000481194 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
CCM2-214ENST00000481194 PATL2C9JE40 543 aaKnown RBP22.31■■□□□ 1.16
CCM2-214ENST00000481194 SH2D4AQ9H788 454 aa22.31■■□□□ 1.16
CCM2-214ENST00000481194 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
CCM2-214ENST00000481194 ARPP21Q9UBL0 812 aaPredicted RBP22.31■■□□□ 1.16
CCM2-214ENST00000481194 GRAPQ13588 217 aa22.3■■□□□ 1.16
CCM2-214ENST00000481194 GRAPLQ8TC17 118 aaPredicted RBP22.3■■□□□ 1.16
CCM2-214ENST00000481194 NF2P35240 595 aa22.3■■□□□ 1.16
CCM2-214ENST00000481194 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
CCM2-214ENST00000481194 LLPHQ9BRT6 129 aaKnown RBP22.3■■□□□ 1.16
CCM2-214ENST00000481194 ALG1Q9BT22 464 aa22.3■■□□□ 1.16
CCM2-214ENST00000481194 HLFQ16534 295 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 MSL1Q68DK7 614 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 NPR1P16066 1061 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 MAP3K11Q16584 847 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 SIRT2Q8IXJ6 389 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 PLA2G12BQ9BX93 195 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 CCDC183Q5T5S1 534 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 CCDC144CPQ8IYA2 1237 aa22.29■■□□□ 1.16
CCM2-214ENST00000481194 PUS3Q9BZE2 481 aaKnown RBP22.28■■□□□ 1.16
CCM2-214ENST00000481194 BAG4O95429 457 aaKnown RBP22.28■■□□□ 1.16
CCM2-214ENST00000481194 CALML3P27482 149 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 DDX19AQ9NUU7 478 aaKnown RBP22.28■■□□□ 1.16
CCM2-214ENST00000481194 NBPF26B4DH59 902 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 SEC24BO95487 1268 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 NBPF10Q6P3W6 841 aaKnown RBP22.28■■□□□ 1.16
CCM2-214ENST00000481194 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 NBPF15Q8N660 670 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 NECAB1Q8N987 351 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 LARP6Q9BRS8 491 aaKnown RBP22.28■■□□□ 1.16
CCM2-214ENST00000481194 VEZTQ9HBM0 779 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
CCM2-214ENST00000481194 SRP68Q9UHB9 627 aaKnown RBP22.27■■□□□ 1.16
CCM2-214ENST00000481194 LRRC2Q9BYS8 371 aa22.27■■□□□ 1.16
CCM2-214ENST00000481194 PPIP5K2O43314 1243 aa22.27■■□□□ 1.16
CCM2-214ENST00000481194 EPS15P42566 896 aa22.27■■□□□ 1.16
CCM2-214ENST00000481194 GUCY1B3Q02153 619 aa22.27■■□□□ 1.16
CCM2-214ENST00000481194 GRIPAP1Q4V328 841 aa22.27■■□□□ 1.16
CCM2-214ENST00000481194 PCP11498 1178 aaKnown RBP22.27■■□□□ 1.15
CCM2-214ENST00000481194 PDE6AP16499 860 aa22.27■■□□□ 1.15
CCM2-214ENST00000481194 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
CCM2-214ENST00000481194 BCAMP50895 628 aa22.26■■□□□ 1.15
CCM2-214ENST00000481194 JAG2Q9Y219 1238 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 GYG1P46976 350 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 SLC4A8Q2Y0W8 1093 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 RRP36Q96EU6 259 aaKnown RBP22.25■■□□□ 1.15
CCM2-214ENST00000481194 AATFQ9NY61 560 aaKnown RBP eCLIP22.25■■□□□ 1.15
CCM2-214ENST00000481194 SMTNL1A8MU46 457 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 APOBRQ0VD83 1088 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 RGS12O14924 1447 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 TEKT1Q969V4 418 aa22.25■■□□□ 1.15
CCM2-214ENST00000481194 ANGEL1Q9UNK9 670 aaKnown RBP22.25■■□□□ 1.15
CCM2-214ENST00000481194 SLIT3O75094 1523 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 KCNQ2O43526 872 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 ATL3Q6DD88 541 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 MFSD14BQ5SR56 506 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 TCEANC2Q96MN5 208 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 RFX7Q2KHR2 1363 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 TXNRD1Q16881 649 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 MPHOSPH6Q99547 160 aaKnown RBP22.24■■□□□ 1.15
CCM2-214ENST00000481194 CBFA2T2O43439 604 aa22.24■■□□□ 1.15
CCM2-214ENST00000481194 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 EIF5P55010 431 aaKnown RBP22.23■■□□□ 1.15
CCM2-214ENST00000481194 UBE2HP62256 183 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 KCNG4Q8TDN1 519 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 ABCC12Q96J65 1359 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 ZMYM1Q5SVZ6 1142 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 CEP89Q96ST8 783 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 PHKA1P46020 1223 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
CCM2-214ENST00000481194 MASTLQ96GX5 879 aa22.23■■□□□ 1.15
CCM2-214ENST00000481194 NWD1Q149M9 1564 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 BRAPQ7Z569 592 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 C6orf50Q9HD87 102 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 F13A1P00488 732 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 KANK3Q6NY19 840 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 TRIM5Q9C035 493 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 KCNQ4P56696 695 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 CCDC173Q0VFZ6 552 aa22.22■■□□□ 1.15
CCM2-214ENST00000481194 RABL6Q3YEC7 729 aaPredicted RBP22.22■■□□□ 1.15
CCM2-214ENST00000481194 PTPDC1A2A3K4 754 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 SASH1O94885 1247 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 ADORA1P30542 326 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 GTF2IP78347 998 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 A0A0D9SFI3 127 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 NT5C2P49902 561 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 LZTS2Q9BRK4 669 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 B4E1Z4 1266 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 PARP1P09874 1014 aaKnown RBP22.21■■□□□ 1.15
CCM2-214ENST00000481194 VAT1LQ9HCJ6 419 aa22.21■■□□□ 1.15
CCM2-214ENST00000481194 RNF214Q8ND24 703 aa22.2■■□□□ 1.14
CCM2-214ENST00000481194 TCP11L1Q9NUJ3 509 aa22.2■■□□□ 1.14
CCM2-214ENST00000481194 AKNAD1Q5T1N1 836 aa22.2■■□□□ 1.14
CCM2-214ENST00000481194 LRRC27Q9C0I9 530 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms