RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 SP8Q8IXZ3 490 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPS1-207ENST00000479988 ANGEL1Q9UNK9 670 aaKnown RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 RAD50Q92878 1312 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 GOLGA6L6A8MZA4 724 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 GSPT1P15170 499 aaKnown RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 TFCP2Q12800 502 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 ITPK1Q13572 414 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 BEND3Q5T5X7 828 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 MIGA1Q8NAN2 632 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 CCDC12Q8WUD4 166 aaPredicted RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 PIBF1Q8WXW3 757 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 IFIT3O14879 490 aaKnown RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 ZFP91Q96JP5 570 aaPredicted RBP6.94□□□□□ -1.3
CPS1-207ENST00000479988 TMEM106CQ9BVX2 250 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 GREM2Q9H772 168 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 HMG20BQ9P0W2 317 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 LIMCH1Q9UPQ0 1083 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 NRXN3Q9Y4C0 1643 aa6.94□□□□□ -1.3
CPS1-207ENST00000479988 PXDNLA1KZ92 1463 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 SEMA3EO15041 775 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 TXLNAP40222 546 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 KLHL40Q2TBA0 621 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 WASF1Q92558 559 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 ANTXR1Q9H6X2 564 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 PNMA3Q9UL41 463 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 KDM4AO75164 1064 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 KRT18P05783 430 aaKnown RBP6.93□□□□□ -1.3
CPS1-207ENST00000479988 OSBPP22059 807 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 PAG1Q9NWQ8 432 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 PNMA6EA0A0J9YXQ4 647 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 ECE2O60344 883 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 GYG1P46976 350 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 SYT17Q9BSW7 474 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 NOL7Q9UMY1 257 aaKnown RBP6.93□□□□□ -1.3
CPS1-207ENST00000479988 ZBED4O75132 1171 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 BAG4O95429 457 aaKnown RBP6.93□□□□□ -1.3
CPS1-207ENST00000479988 GYS1P13807 737 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 CDC37L1Q7L3B6 337 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 PAGR1Q9BTK6 254 aa6.93□□□□□ -1.3
CPS1-207ENST00000479988 GNAQP50148 359 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 HUNKP57058 714 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 TIMM10P62072 90 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 MTX1Q13505 466 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 ZYXQ15942 572 aaKnown RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 HLFQ16534 295 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 KIF4BQ2VIQ3 1234 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 TICAM2Q86XR7 235 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 SUCLG2Q96I99 432 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 CNNM2Q9H8M5 875 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 PDRG1Q9NUG6 133 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 SAP30BPQ9UHR5 308 aaKnown RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 AKAP12Q02952 1782 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 CEMIPQ8WUJ3 1361 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 ZNF157P51786 506 aaPredicted RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 KRT23Q9C075 422 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 GRPEL1Q9HAV7 217 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 VAT1LQ9HCJ6 419 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 BSDC1Q9NW68 430 aaPredicted RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 BRPF3Q9ULD4 1205 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 CNGA1P29973 690 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 BCAMP50895 628 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 MKRN3Q13064 507 aaKnown RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 POLA2Q14181 598 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 NRKQ7Z2Y5 1582 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 FAM43AQ8N2R8 423 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 TMX3Q96JJ7 454 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 CNOT7Q9UIV1 285 aaKnown RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 SLC12A7Q9Y666 1083 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 GLIPR1L2Q4G1C9 344 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 OTUD7AQ8TE49 926 aaPredicted RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
CPS1-207ENST00000479988 HOOK1Q9UJC3 728 aaKnown RBP6.92□□□□□ -1.3
CPS1-207ENST00000479988 RPS12P25398 132 aaKnown RBP6.91□□□□□ -1.3
CPS1-207ENST00000479988 CCDC173Q0VFZ6 552 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 PROSER3Q2NL68 480 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 SPATA5Q8NB90 893 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 JAKMIP1Q96N16 626 aaKnown RBP6.91□□□□□ -1.3
CPS1-207ENST00000479988 ATP6V0A2Q9Y487 856 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 PRAMEF22A3QJZ6 481 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 SGSM2O43147 1006 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
CPS1-207ENST00000479988 SMIM5Q71RC9 77 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 MICALL2Q8IY33 904 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 CSRNP1Q96S65 589 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 AATFQ9NY61 560 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPS1-207ENST00000479988 PDE8BO95263 885 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 NBPF7P0C2Y1 421 aaPredicted RBP6.91□□□□□ -1.3
CPS1-207ENST00000479988 FOSBP53539 338 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 TPM4P67936 248 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 TPD52L1Q16890 204 aaPredicted RBP6.91□□□□□ -1.3
CPS1-207ENST00000479988 CREBRFQ8IUR6 639 aa6.91□□□□□ -1.3
CPS1-207ENST00000479988 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.91□□□□□ -1.3
CPS1-207ENST00000479988 MAPKAPK5Q8IW41 473 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms