RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 XRCC5P13010 732 aaKnown RBP9.55□□□□□ -0.88
COMMD3-212ENST00000479958 FSTP19883 344 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 GRM2Q14416 872 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 POU4F3Q15319 338 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 DTHD1Q6ZMT9 781 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 CLEC10AQ8IUN9 316 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 AEBP1Q8IUX7 1158 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 ASB16Q96NS5 453 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 SCO2A0A1W2PP80 73 aa9.54□□□□□ -0.88
COMMD3-212ENST00000479958 BMP3P12645 472 aa9.54□□□□□ -0.88
COMMD3-212ENST00000479958 ENOX2Q16206 610 aaKnown RBP9.54□□□□□ -0.88
COMMD3-212ENST00000479958 CORO1BQ9BR76 489 aa9.54□□□□□ -0.88
COMMD3-212ENST00000479958 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
COMMD3-212ENST00000479958 ABCB6Q9NP58 842 aa9.54□□□□□ -0.88
COMMD3-212ENST00000479958 MAOBP27338 520 aa9.53□□□□□ -0.88
COMMD3-212ENST00000479958 MAPK8P45983 427 aa9.53□□□□□ -0.88
COMMD3-212ENST00000479958 FAM20CQ8IXL6 584 aa9.53□□□□□ -0.88
COMMD3-212ENST00000479958 RAD18Q9NS91 495 aa9.53□□□□□ -0.88
COMMD3-212ENST00000479958 PREPP48147 710 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 USP11P51784 963 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 ATP2B2Q01814 1243 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.52□□□□□ -0.89
COMMD3-212ENST00000479958 ALG1LQ6GMV1 187 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
COMMD3-212ENST00000479958 FBF1Q8TES7 1133 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 FAM83CQ9BQN1 747 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 BCO2Q9BYV7 579 aa9.52□□□□□ -0.89
COMMD3-212ENST00000479958 IGLV1-40P01703 118 aa9.51□□□□□ -0.89
COMMD3-212ENST00000479958 FCGRTP55899 365 aa9.51□□□□□ -0.89
COMMD3-212ENST00000479958 HNRNPUQ00839 825 aaKnown RBP eCLIP9.51□□□□□ -0.89
COMMD3-212ENST00000479958 PPP2R3AQ06190 1150 aa9.51□□□□□ -0.89
COMMD3-212ENST00000479958 Q8N3U1 123 aa9.51□□□□□ -0.89
COMMD3-212ENST00000479958 RXRBP28702 533 aa9.5□□□□□ -0.89
COMMD3-212ENST00000479958 BEND4Q6ZU67 534 aa9.5□□□□□ -0.89
COMMD3-212ENST00000479958 GLIS3Q8NEA6 775 aa9.5□□□□□ -0.89
COMMD3-212ENST00000479958 RNF112Q9ULX5 631 aa9.5□□□□□ -0.89
COMMD3-212ENST00000479958 GIPC1O14908 333 aa9.49□□□□□ -0.89
COMMD3-212ENST00000479958 DLGAP3O95886 979 aa9.49□□□□□ -0.89
COMMD3-212ENST00000479958 SOX4Q06945 474 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-212ENST00000479958 TRIM42Q8IWZ5 723 aa9.49□□□□□ -0.89
COMMD3-212ENST00000479958 YIPF2Q9BWQ6 316 aa9.49□□□□□ -0.89
COMMD3-212ENST00000479958 NRSN2Q9GZP1 204 aa9.49□□□□□ -0.89
COMMD3-212ENST00000479958 C7orf69Q9H7B7 122 aa9.49□□□□□ -0.89
COMMD3-212ENST00000479958 TIAF1O95411 115 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 FMR1Q06787 632 aaKnown RBP eCLIP9.48□□□□□ -0.89
COMMD3-212ENST00000479958 RNF43Q68DV7 783 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 NXPE4Q6UWF7 544 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 PI16Q6UXB8 463 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 HMX2A2RU54 273 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 DRD2P14416 443 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 MAP4P27816 1152 aaKnown RBP9.48□□□□□ -0.89
COMMD3-212ENST00000479958 NFIAQ12857 509 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 GIMAP7Q8NHV1 300 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
COMMD3-212ENST00000479958 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-212ENST00000479958 FGD1P98174 961 aa9.47□□□□□ -0.89
COMMD3-212ENST00000479958 PDE3AQ14432 1141 aa9.47□□□□□ -0.89
COMMD3-212ENST00000479958 ARTNQ5T4W7 220 aa9.47□□□□□ -0.89
COMMD3-212ENST00000479958 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
COMMD3-212ENST00000479958 ZFP64Q9NPA5 681 aa9.47□□□□□ -0.89
COMMD3-212ENST00000479958 GPN3Q9UHW5 284 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-212ENST00000479958 DBNDD2Q9BQY9 259 aa9.46□□□□□ -0.9
COMMD3-212ENST00000479958 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
COMMD3-212ENST00000479958 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 GSTT1P30711 240 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 LRP8Q14114 963 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 PAOXQ6QHF9 649 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
COMMD3-212ENST00000479958 FRMD6Q96NE9 622 aa9.45□□□□□ -0.9
COMMD3-212ENST00000479958 FAM95CA0A1B0GW59 222 aa9.44□□□□□ -0.9
COMMD3-212ENST00000479958 FAAP100Q0VG06 881 aa9.44□□□□□ -0.9
COMMD3-212ENST00000479958 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
COMMD3-212ENST00000479958 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
COMMD3-212ENST00000479958 C2CD4AQ8NCU7 369 aaPredicted RBP9.44□□□□□ -0.9
COMMD3-212ENST00000479958 SYNGAP1Q96PV0 1343 aa9.44□□□□□ -0.9
COMMD3-212ENST00000479958 ADH5P11766 374 aa9.43□□□□□ -0.9
COMMD3-212ENST00000479958 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
COMMD3-212ENST00000479958 EMILIN2Q9BXX0 1053 aa9.43□□□□□ -0.9
COMMD3-212ENST00000479958 CEP44Q9C0F1 390 aa9.43□□□□□ -0.9
COMMD3-212ENST00000479958 AOC2O75106 756 aa9.42□□□□□ -0.9
COMMD3-212ENST00000479958 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
COMMD3-212ENST00000479958 CTSBP07858 339 aa9.42□□□□□ -0.9
COMMD3-212ENST00000479958 FBLIM1Q8WUP2 373 aa9.42□□□□□ -0.9
COMMD3-212ENST00000479958 WWC3Q9ULE0 1092 aa9.42□□□□□ -0.9
COMMD3-212ENST00000479958 SAMM50Q9Y512 469 aa9.42□□□□□ -0.9
COMMD3-212ENST00000479958 HYAL3O43820 417 aaPredicted RBP9.41□□□□□ -0.9
COMMD3-212ENST00000479958 GSTP1P09211 210 aaKnown RBP9.41□□□□□ -0.9
COMMD3-212ENST00000479958 GRIK1P39086 918 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 ASPAP45381 313 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 MAP7Q14244 749 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 COL19A1Q14993 1142 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 CDPF1Q6NVV7 123 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 ATG3Q9NT62 314 aa9.41□□□□□ -0.9
COMMD3-212ENST00000479958 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms