RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
CLDN18-203ENST00000479660 GNAT2P19087 354 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 FGD1P98174 961 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
CLDN18-203ENST00000479660 ADGRA1Q86SQ6 560 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 CCDC83Q8IWF9 413 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 MCM4P33991 863 aa17.1■□□□□ 0.33
CLDN18-203ENST00000479660 EXOSC10Q01780 885 aaKnown RBP17.1■□□□□ 0.33
CLDN18-203ENST00000479660 ALX1Q15699 326 aa17.1■□□□□ 0.33
CLDN18-203ENST00000479660 IFNL3Q8IZI9 196 aa17.1■□□□□ 0.33
CLDN18-203ENST00000479660 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
CLDN18-203ENST00000479660 LRRC2Q9BYS8 371 aa17.1■□□□□ 0.33
CLDN18-203ENST00000479660 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
CLDN18-203ENST00000479660 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
CLDN18-203ENST00000479660 TBC1D16Q8TBP0 767 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 NSUN4Q96CB9 384 aaKnown RBP17.09■□□□□ 0.33
CLDN18-203ENST00000479660 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 GBP4Q96PP9 640 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 NAPBQ9H115 298 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 POLLQ9UGP5 575 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 SLC4A4Q9Y6R1 1079 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 MYH13Q9UKX3 1938 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 MAGEB6P1A0A0J9YX57 407 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 PRKAB2O43741 272 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 NACAP1Q9BZK3 213 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
CLDN18-203ENST00000479660 C6orf229H3BNL8 230 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 PRDX5P30044 214 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 MECOMQ03112 1051 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 NCOA7Q8NI08 942 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 WDR66Q8TBY9 1149 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 ZNF384Q8TF68 577 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 BRF1Q92994 677 aa17.08■□□□□ 0.33
CLDN18-203ENST00000479660 EPB41L4AQ9HCS5 686 aaPredicted RBP17.08■□□□□ 0.33
CLDN18-203ENST00000479660 LAMA4Q16363 1823 aa17.08■□□□□ 0.32
CLDN18-203ENST00000479660 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
CLDN18-203ENST00000479660 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
CLDN18-203ENST00000479660 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
CLDN18-203ENST00000479660 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLDN18-203ENST00000479660 CD209Q9NNX6 404 aa17.08■□□□□ 0.32
CLDN18-203ENST00000479660 ZDHHC9Q9Y397 364 aa17.08■□□□□ 0.32
CLDN18-203ENST00000479660 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
CLDN18-203ENST00000479660 ST3GAL1Q11201 340 aa17.07■□□□□ 0.32
CLDN18-203ENST00000479660 TRDNQ13061 729 aa17.07■□□□□ 0.32
CLDN18-203ENST00000479660 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
CLDN18-203ENST00000479660 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
CLDN18-203ENST00000479660 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
CLDN18-203ENST00000479660 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
CLDN18-203ENST00000479660 TDO2P48775 406 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 STK3Q13188 491 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 C2CD5Q86YS7 1000 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
CLDN18-203ENST00000479660 H0YIN7 160 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 MCM5P33992 734 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
CLDN18-203ENST00000479660 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
CLDN18-203ENST00000479660 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
CLDN18-203ENST00000479660 BRD1O95696 1058 aa17.05■□□□□ 0.32
CLDN18-203ENST00000479660 IL1R1P14778 569 aa17.05■□□□□ 0.32
CLDN18-203ENST00000479660 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
CLDN18-203ENST00000479660 CLEC17AQ6ZS10 378 aa17.05■□□□□ 0.32
CLDN18-203ENST00000479660 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
CLDN18-203ENST00000479660 MPNDQ8N594 471 aa17.05■□□□□ 0.32
CLDN18-203ENST00000479660 SDR42E1Q8WUS8 393 aa17.05■□□□□ 0.32
CLDN18-203ENST00000479660 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
CLDN18-203ENST00000479660 GJB2P29033 226 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 FBXL16Q8N461 479 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 PDGFDQ9GZP0 370 aaPredicted RBP17.04■□□□□ 0.32
CLDN18-203ENST00000479660 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 PRC1O43663 620 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 IGSF3O75054 1194 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
CLDN18-203ENST00000479660 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLDN18-203ENST00000479660 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
CLDN18-203ENST00000479660 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
CLDN18-203ENST00000479660 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
CLDN18-203ENST00000479660 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
CLDN18-203ENST00000479660 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
CLDN18-203ENST00000479660 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
CLDN18-203ENST00000479660 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
CLDN18-203ENST00000479660 DTNBO60941 627 aa17.03■□□□□ 0.32
CLDN18-203ENST00000479660 CTDSPL2Q05D32 466 aa17.03■□□□□ 0.32
CLDN18-203ENST00000479660 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
CLDN18-203ENST00000479660 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
CLDN18-203ENST00000479660 ANTXR2P58335 489 aa17.02■□□□□ 0.32
CLDN18-203ENST00000479660 LTBP1Q14766 1721 aa17.02■□□□□ 0.32
CLDN18-203ENST00000479660 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
CLDN18-203ENST00000479660 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
CLDN18-203ENST00000479660 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
CLDN18-203ENST00000479660 B4E1Z4 1266 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms