RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 MCAMP43121 646 aa28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 GSDMDP57764 484 aa28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 KIF23Q02241 960 aaPredicted RBP28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 NLRP10Q86W26 655 aa28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 ANKRD7Q92527 254 aa28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 ANGEL1Q9UNK9 670 aaKnown RBP28.63■■■□□ 2.17
SYNGAP1-206ENST00000479510 CMA1P23946 247 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 NDUFA8P51970 172 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 ZRSR1Q15695 479 aaKnown RBP28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 ANO1Q5XXA6 986 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 IMPACTQ9P2X3 320 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 C4AP0C0L4 1744 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 C4BP0C0L5 1744 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 TNNT1P13805 278 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 ITGA6P23229 1130 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 CTSWP56202 376 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 EVA1CP58658 441 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 VGLL2Q8N8G2 317 aa28.62■■■□□ 2.17
SYNGAP1-206ENST00000479510 AKAP11Q9UKA4 1901 aa28.61■■■□□ 2.17
SYNGAP1-206ENST00000479510 TIGD1Q96MW7 591 aa28.61■■■□□ 2.17
SYNGAP1-206ENST00000479510 A0A1B0GVL5 298 aa28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 UQCRFS1P1P0C7P4 283 aa28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 CPLX2Q6PUV4 134 aaKnown RBP28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 TMEM87BQ96K49 555 aa28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 ALX1Q15699 326 aa28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 TPD52L1Q16890 204 aaPredicted RBP28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 AOPEPQ8N6M6 819 aa28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 PIGBQ92521 554 aa28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 OSBPL5Q9H0X9 879 aaPredicted RBP28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 ZNF330Q9Y3S2 320 aaPredicted RBP28.6■■■□□ 2.17
SYNGAP1-206ENST00000479510 SLC9C2Q5TAH2 1124 aa28.59■■■□□ 2.17
SYNGAP1-206ENST00000479510 OTUD7BQ6GQQ9 843 aa28.59■■■□□ 2.17
SYNGAP1-206ENST00000479510 TSC1Q92574 1164 aa28.59■■■□□ 2.17
SYNGAP1-206ENST00000479510 C16orf45Q96MC5 204 aaPredicted RBP28.59■■■□□ 2.17
SYNGAP1-206ENST00000479510 PPFIA3O75145 1194 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 POLR3DP05423 398 aaPredicted RBP28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 ARID4AP29374 1257 aaPredicted RBP28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 SLC39A14Q15043 492 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 AXDND1Q5T1B0 1012 aaPredicted RBP28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 GREM2Q9H772 168 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 CNNM1Q9NRU3 951 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 ASAP1Q9ULH1 1129 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 SH2B2O14492 632 aaPredicted RBP28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 TPM4P67936 248 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 PI16Q6UXB8 463 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 NBPF3Q9H094 633 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 TBC1D2BQ9UPU7 963 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 NEDD4P46934 1319 aa28.58■■■□□ 2.17
SYNGAP1-206ENST00000479510 ANKRD36CQ5JPF3 1778 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 PDE8BO95263 885 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 SLC3A2P08195 630 aaKnown RBP28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 NLRP12P59046 1061 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 JMYQ8N9B5 988 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCDC85AQ96PX6 553 aaPredicted RBP28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 STRN4Q9NRL3 753 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 SLAIN2Q9P270 581 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 ZNF202O95125 648 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 LRP6O75581 1613 aa28.57■■■□□ 2.16
SYNGAP1-206ENST00000479510 PPP6R2O75170 966 aa28.56■■■□□ 2.16
SYNGAP1-206ENST00000479510 SKILP12757 684 aa28.56■■■□□ 2.16
SYNGAP1-206ENST00000479510 METAP2P50579 478 aaKnown RBP eCLIP28.56■■■□□ 2.16
SYNGAP1-206ENST00000479510 AK7Q96M32 723 aa28.56■■■□□ 2.16
SYNGAP1-206ENST00000479510 MYH3P11055 1940 aa28.56■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCDC69A6NI79 296 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 SMAP1Q8IYB5 467 aaPredicted RBP28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 FAM237AA0A1B0GTK4 181 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 ERVV-1B6SEH8 477 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 KIF28PB7ZC32 967 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 IRS4O14654 1257 aaPredicted RBP28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 PDE8AO60658 829 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 PDCL2Q8N4E4 241 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 LRP5O75197 1615 aa28.55■■■□□ 2.16
SYNGAP1-206ENST00000479510 KIF2AO00139 706 aaPredicted RBP28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCZ1BP86790 482 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCZ1P86791 482 aaPredicted RBP28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 SGMS1Q86VZ5 419 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 TBC1D10CQ8IV04 446 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCDC112Q8NEF3 446 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 ALG1Q9BT22 464 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 PIH1D3Q9NQM4 214 aaKnown RBP28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 PDE6AP16499 860 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 HLFQ16534 295 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 NYAP1Q6ZVC0 841 aa28.54■■■□□ 2.16
SYNGAP1-206ENST00000479510 MROH5Q6ZUA9 1318 aa28.53■■■□□ 2.16
SYNGAP1-206ENST00000479510 PFKFB1P16118 471 aa28.53■■■□□ 2.16
SYNGAP1-206ENST00000479510 DPCR1Q3MIW9 517 aa28.53■■■□□ 2.16
SYNGAP1-206ENST00000479510 CEP135Q66GS9 1140 aa28.53■■■□□ 2.16
SYNGAP1-206ENST00000479510 APOA5Q6Q788 366 aa28.53■■■□□ 2.16
SYNGAP1-206ENST00000479510 IKBKBO14920 756 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 PUM3Q15397 648 aaKnown RBP28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCDC102BQ68D86 513 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 CCDC150Q8NCX0 1101 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 LPIN2Q92539 896 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 ZMYND15Q9H091 742 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 ZNF532Q9HCE3 1301 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 STK36Q9NRP7 1315 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 TCRBV5S4A2TA0A5A2 114 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 CYP19A1P11511 503 aaPredicted RBP28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 LIFRP42702 1097 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 KCNJ6P48051 423 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms