RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 FBXO38Q6PIJ6 1188 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 SLC30A9Q6PML9 568 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 MTHFD1LQ6UB35 978 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 TMEM110Q86TL2 294 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 DHX36Q9H2U1 1008 aaKnown RBP7.86□□□□□ -1.15
SPATA9-204ENST00000477047 TSPY26PQ9H489 355 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 QTRT2Q9H974 415 aaKnown RBP7.86□□□□□ -1.15
SPATA9-204ENST00000477047 ATP6V0A4Q9HBG4 840 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 EMILIN3Q9NT22 766 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 CROTQ9UKG9 612 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 TMCC3Q9ULS5 477 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 ZNF510Q9Y2H8 683 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 TTLL3Q9Y4R7 772 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 ATAD2Q6PL18 1390 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 ANKRD36BQ8N2N9 1353 aa7.86□□□□□ -1.15
SPATA9-204ENST00000477047 EME2A4GXA9 379 aaPredicted RBP7.85□□□□□ -1.15
SPATA9-204ENST00000477047 SPDYE3A6NKU9 549 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 TBKBP1A7MCY6 615 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 CLASP2O75122 1294 aaKnown RBP7.85□□□□□ -1.15
SPATA9-204ENST00000477047 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 ATP6V1G1O75348 118 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 TUBB4AP04350 444 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 CCNCP24863 283 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 MCM3P25205 808 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 WASHC5Q12768 1159 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 TRIM29Q14134 588 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 SUZ12Q15022 739 aaKnown RBP7.85□□□□□ -1.15
SPATA9-204ENST00000477047 CCDC144BQ3MJ40 725 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 Q4G0T1 1027 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 ZNF662Q6ZS27 426 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 CCDC144CPQ8IYA2 1237 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 FRS2Q8WU20 508 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 SREK1Q8WXA9 508 aaKnown RBP7.85□□□□□ -1.15
SPATA9-204ENST00000477047 PPP2R3CQ969Q6 453 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 LRRC45Q96CN5 670 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 EPAS1Q99814 870 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 SLC39A3Q9BRY0 314 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 TRIM4Q9C037 500 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 TANGO6Q9C0B7 1094 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 PHACTR1Q9C0D0 580 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 KIF9Q9HAQ2 790 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 SEL1LQ9UBV2 794 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 AXIN2Q9Y2T1 843 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 CCDC171Q6TFL3 1326 aa7.85□□□□□ -1.15
SPATA9-204ENST00000477047 LRRC10BA6NIK2 292 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CHL1O00533 1208 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 KIF3BO15066 747 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 P4HA2O15460 535 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 STAM2O75886 525 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 DESP17661 470 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 PHEXP78562 749 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 DSG2Q14126 1118 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 ARHGEF6Q15052 776 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 RCN1Q15293 331 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 PPIP5K1Q6PFW1 1433 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CPLX2Q6PUV4 134 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 SAPCD2Q86UD0 394 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CEP57Q86XR8 500 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 KIAA0825Q8IV33 1275 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CCAR1Q8IX12 1150 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CLASRPQ8N2M8 674 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 FAM200AQ8TCP9 573 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 RBM41Q96IZ5 413 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 MAML3Q96JK9 1138 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 BHMT2Q9H2M3 363 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 VCX3BQ9H321 246 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 KLHL42Q9P2K6 505 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 FAN1Q9Y2M0 1017 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 SOGA1O94964 1423 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CLIP1P30622 1438 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 VPS8Q8N3P4 1428 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 ERICH2A1L162 156 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 TTI1O43156 1089 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 ZNF189O75820 626 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 PARNO95453 639 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 MBD3O95983 291 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 MYCLP1P12525 358 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 RANBP1P43487 201 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CLNS1AP54105 237 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CTAG1AP78358 180 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CUL4BQ13620 913 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 GNPTABQ3T906 1256 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 COBLL1Q53SF7 1204 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 EMC10Q5UCC4 262 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 NYAP1Q6ZVC0 841 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 DZIP1Q86YF9 867 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 REXO1L1PQ8IX06 675 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CUL5Q93034 780 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 HOOK2Q96ED9 719 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 RNPC3Q96LT9 517 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 JPH2Q9BR39 696 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CORO1BQ9BR76 489 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 CAPS2Q9BXY5 557 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 ACBD3Q9H3P7 528 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 TRMT1Q9NXH9 659 aaKnown RBP7.84□□□□□ -1.15
SPATA9-204ENST00000477047 HDAC6Q9UBN7 1215 aa7.84□□□□□ -1.15
SPATA9-204ENST00000477047 SSX2IPQ9Y2D8 614 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms