RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
SPATA9-204ENST00000477047 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
SPATA9-204ENST00000477047 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
SPATA9-204ENST00000477047 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
SPATA9-204ENST00000477047 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
SPATA9-204ENST00000477047 FOXD1Q16676 465 aa16.42■□□□□ 0.22
SPATA9-204ENST00000477047 MSH5O43196 834 aa15.93■□□□□ 0.14
SPATA9-204ENST00000477047 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
SPATA9-204ENST00000477047 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
SPATA9-204ENST00000477047 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
SPATA9-204ENST00000477047 ADRA2BP18089 450 aa14.08□□□□□ -0.16
SPATA9-204ENST00000477047 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
SPATA9-204ENST00000477047 POTEHQ6S545 545 aa13.82□□□□□ -0.2
SPATA9-204ENST00000477047 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
SPATA9-204ENST00000477047 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
SPATA9-204ENST00000477047 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
SPATA9-204ENST00000477047 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
SPATA9-204ENST00000477047 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
SPATA9-204ENST00000477047 MYT1Q01538 1121 aa12.93□□□□□ -0.34
SPATA9-204ENST00000477047 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
SPATA9-204ENST00000477047 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
SPATA9-204ENST00000477047 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
SPATA9-204ENST00000477047 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
SPATA9-204ENST00000477047 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
SPATA9-204ENST00000477047 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.44
SPATA9-204ENST00000477047 SLC24A1O60721 1099 aa12.17□□□□□ -0.46
SPATA9-204ENST00000477047 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
SPATA9-204ENST00000477047 DSG3P32926 999 aa12.11□□□□□ -0.47
SPATA9-204ENST00000477047 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
SPATA9-204ENST00000477047 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
SPATA9-204ENST00000477047 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
SPATA9-204ENST00000477047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPATA9-204ENST00000477047 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
SPATA9-204ENST00000477047 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
SPATA9-204ENST00000477047 APLP2Q06481 763 aa11.84□□□□□ -0.51
SPATA9-204ENST00000477047 CAPN15O75808 1086 aa11.8□□□□□ -0.52
SPATA9-204ENST00000477047 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
SPATA9-204ENST00000477047 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
SPATA9-204ENST00000477047 KCNA4P22459 653 aa11.7□□□□□ -0.54
SPATA9-204ENST00000477047 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
SPATA9-204ENST00000477047 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
SPATA9-204ENST00000477047 EHMT2Q96KQ7 1210 aa11.63□□□□□ -0.55
SPATA9-204ENST00000477047 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
SPATA9-204ENST00000477047 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
SPATA9-204ENST00000477047 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
SPATA9-204ENST00000477047 LHX8Q68G74 356 aa11.5□□□□□ -0.57
SPATA9-204ENST00000477047 HAX1O00165 279 aa11.49□□□□□ -0.57
SPATA9-204ENST00000477047 ABCB7O75027 752 aa11.4□□□□□ -0.58
SPATA9-204ENST00000477047 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
SPATA9-204ENST00000477047 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
SPATA9-204ENST00000477047 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
SPATA9-204ENST00000477047 EVX2Q03828 476 aa11.24□□□□□ -0.61
SPATA9-204ENST00000477047 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
SPATA9-204ENST00000477047 ZNF219Q9P2Y4 722 aaPredicted RBP11.22□□□□□ -0.61
SPATA9-204ENST00000477047 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
SPATA9-204ENST00000477047 HRCP23327 699 aa11.16□□□□□ -0.62
SPATA9-204ENST00000477047 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPATA9-204ENST00000477047 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
SPATA9-204ENST00000477047 EIF5BO60841 1220 aaKnown RBP11.02□□□□□ -0.65
SPATA9-204ENST00000477047 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
SPATA9-204ENST00000477047 FAM9AQ8IZU1 332 aaPredicted RBP10.97□□□□□ -0.65
SPATA9-204ENST00000477047 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
SPATA9-204ENST00000477047 GABBR2O75899 941 aa10.93□□□□□ -0.66
SPATA9-204ENST00000477047 REM2Q8IYK8 340 aaPredicted RBP10.92□□□□□ -0.66
SPATA9-204ENST00000477047 POTEMA6NI47 508 aa10.9□□□□□ -0.67
SPATA9-204ENST00000477047 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
SPATA9-204ENST00000477047 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
SPATA9-204ENST00000477047 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
SPATA9-204ENST00000477047 ARXQ96QS3 562 aa10.78□□□□□ -0.68
SPATA9-204ENST00000477047 ZBTB22O15209 634 aa10.77□□□□□ -0.69
SPATA9-204ENST00000477047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
SPATA9-204ENST00000477047 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
SPATA9-204ENST00000477047 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
SPATA9-204ENST00000477047 UBE2Q2Q8WVN8 375 aa10.71□□□□□ -0.69
SPATA9-204ENST00000477047 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
SPATA9-204ENST00000477047 POTEIP0CG38 1075 aa10.69□□□□□ -0.7
SPATA9-204ENST00000477047 RANGAP1P46060 587 aaPredicted RBP10.66□□□□□ -0.7
SPATA9-204ENST00000477047 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.71
SPATA9-204ENST00000477047 POLA2Q14181 598 aa10.64□□□□□ -0.71
SPATA9-204ENST00000477047 ANP32EQ9BTT0 268 aa10.62□□□□□ -0.71
SPATA9-204ENST00000477047 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
SPATA9-204ENST00000477047 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
SPATA9-204ENST00000477047 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.72
SPATA9-204ENST00000477047 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
SPATA9-204ENST00000477047 PODXL2Q9NZ53 605 aa10.47□□□□□ -0.73
SPATA9-204ENST00000477047 ZEB1P37275 1124 aaPredicted RBP10.46□□□□□ -0.74
SPATA9-204ENST00000477047 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
SPATA9-204ENST00000477047 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
SPATA9-204ENST00000477047 ERICH6BQ5W0A0 696 aa10.38□□□□□ -0.75
SPATA9-204ENST00000477047 MYT1LQ9UL68 1186 aa10.36□□□□□ -0.75
SPATA9-204ENST00000477047 PKNOX2Q96KN3 472 aa10.35□□□□□ -0.75
SPATA9-204ENST00000477047 OSCARQ8IYS5 282 aa10.35□□□□□ -0.75
SPATA9-204ENST00000477047 ZBTB12Q9Y330 459 aaPredicted RBP10.34□□□□□ -0.75
SPATA9-204ENST00000477047 PPARGC1BQ86YN6 1023 aaKnown RBP10.32□□□□□ -0.76
SPATA9-204ENST00000477047 NEFLP07196 543 aa10.31□□□□□ -0.76
SPATA9-204ENST00000477047 HOMEZQ8IX15 550 aa10.31□□□□□ -0.76
SPATA9-204ENST00000477047 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
SPATA9-204ENST00000477047 GTF3C3Q9Y5Q9 886 aa10.31□□□□□ -0.76
SPATA9-204ENST00000477047 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
SPATA9-204ENST00000477047 POTEB2H3BUK9 544 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms