RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 HCN4Q9Y3Q4 1203 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 REV3LO60673 3130 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 XIRP2A4UGR9 3374 aa8.46□□□□□ -1.05
CLDN4-205ENST00000476494 IRF6O14896 467 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 FLT3LGP49771 235 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 MRE11P49959 708 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 MOGSQ13724 837 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 RASA3Q14644 834 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 TXNRD3Q86VQ6 643 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 ZNF428Q96B54 188 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 FAM89AQ96GI7 184 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.06
CLDN4-205ENST00000476494 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 EPHX3Q9H6B9 360 aa8.46□□□□□ -1.06
CLDN4-205ENST00000476494 ATP2B4P23634 1241 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 MAP3K9P80192 1104 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
CLDN4-205ENST00000476494 SHHQ15465 462 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 LRRC26Q2I0M4 334 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 HSP90AB3PQ58FF7 597 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 NECAB3Q96P71 396 aaPredicted RBP8.45□□□□□ -1.06
CLDN4-205ENST00000476494 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLDN4-205ENST00000476494 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 OGDHLQ9ULD0 1010 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 MED23Q9ULK4 1368 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
CLDN4-205ENST00000476494 WDFY4Q6ZS81 3184 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 CLRN2A0PK11 232 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 HTATSF1O43719 755 aaKnown RBP8.44□□□□□ -1.06
CLDN4-205ENST00000476494 ANXA1P04083 346 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 C9orf50Q5SZB4 431 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 TTLL5Q6EMB2 1281 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 ISCA1Q9BUE6 129 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 XDHP47989 1333 aa8.44□□□□□ -1.06
CLDN4-205ENST00000476494 MYBBP1AQ9BQG0 1328 aaKnown RBP8.44□□□□□ -1.06
CLDN4-205ENST00000476494 GPR37L1O60883 481 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
CLDN4-205ENST00000476494 BMP1P13497 986 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 PRKAR2BP31323 418 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 FCGRTP55899 365 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 MRPS5P82675 430 aaKnown RBP8.43□□□□□ -1.06
CLDN4-205ENST00000476494 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 ERO1BQ86YB8 467 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 COA1Q9GZY4 146 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 CFAP54Q96N23 3096 aa8.43□□□□□ -1.06
CLDN4-205ENST00000476494 PDHXO00330 501 aa8.42□□□□□ -1.06
CLDN4-205ENST00000476494 PPIL2Q13356 520 aa8.42□□□□□ -1.06
CLDN4-205ENST00000476494 CC2D1BQ5T0F9 858 aaKnown RBP8.42□□□□□ -1.06
CLDN4-205ENST00000476494 ARAP2Q8WZ64 1704 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 IRS4O14654 1257 aaPredicted RBP8.41□□□□□ -1.06
CLDN4-205ENST00000476494 U2SURPO15042 1029 aaKnown RBP8.41□□□□□ -1.06
CLDN4-205ENST00000476494 GTF2IP78347 998 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 TRIM32Q13049 653 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 TMEM31Q5JXX7 168 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 POTEEQ6S8J3 1075 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 XAGE3Q8WTP9 111 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 RTF1Q92541 710 aaKnown RBP8.41□□□□□ -1.06
CLDN4-205ENST00000476494 THEGQ9P2T0 379 aa8.41□□□□□ -1.06
CLDN4-205ENST00000476494 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 USP34Q70CQ2 3546 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 ZDBF2Q9HCK1 2354 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 KLRK1P26718 216 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 TRIM28Q13263 835 aaKnown RBP8.4□□□□□ -1.06
CLDN4-205ENST00000476494 AKNAD1Q5T1N1 836 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 MAP3K21Q5TCX8 1036 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 KHSRPQ92945 711 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLDN4-205ENST00000476494 ZKSCAN4Q969J2 545 aaPredicted RBP8.4□□□□□ -1.06
CLDN4-205ENST00000476494 VEZTQ9HBM0 779 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 MINPP1Q9UNW1 487 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 CSADQ9Y600 493 aa8.4□□□□□ -1.06
CLDN4-205ENST00000476494 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.07
CLDN4-205ENST00000476494 PLXNB2O15031 1838 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 CYP2C8P10632 490 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 PPP2R1AP30153 589 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
CLDN4-205ENST00000476494 PPATQ06203 517 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 SPDYE2Q495Y8 402 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
CLDN4-205ENST00000476494 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
CLDN4-205ENST00000476494 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
CLDN4-205ENST00000476494 FBXW7Q969H0 707 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 GJD2Q9UKL4 321 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
CLDN4-205ENST00000476494 DLG5Q8TDM6 1919 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms