RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 IGHMBP2P38935 993 aaKnown RBP18.73■□□□□ 0.59
VARS2-207ENST00000476162 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
VARS2-207ENST00000476162 USP25Q9UHP3 1055 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
VARS2-207ENST00000476162 TBC1D10CQ8IV04 446 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 HPS5Q9UPZ3 1129 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 GOLGA8BA8MQT2 603 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 BCAMP50895 628 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 TRDNQ13061 729 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 MAP3K11Q16584 847 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 FAM98CQ17RN3 349 aaKnown RBP18.72■□□□□ 0.59
VARS2-207ENST00000476162 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 MAGEB6Q8N7X4 407 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 NKX2-3Q8TAU0 364 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 BICD2Q8TD16 824 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
VARS2-207ENST00000476162 STRBPQ96SI9 672 aaKnown RBP18.72■□□□□ 0.59
VARS2-207ENST00000476162 RREB1Q92766 1687 aa18.71■□□□□ 0.59
VARS2-207ENST00000476162 CCDC192P0DO97 292 aa18.71■□□□□ 0.59
VARS2-207ENST00000476162 FTOQ9C0B1 505 aaKnown RBP eCLIP18.71■□□□□ 0.59
VARS2-207ENST00000476162 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
VARS2-207ENST00000476162 NR1I2O75469 434 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 KCNQ4P56696 695 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 MAP3K12Q12852 859 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 TNMDQ9H2S6 317 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 WDR19Q8NEZ3 1342 aa18.7■□□□□ 0.58
VARS2-207ENST00000476162 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
VARS2-207ENST00000476162 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
VARS2-207ENST00000476162 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
VARS2-207ENST00000476162 DDX60Q8IY21 1712 aaKnown RBP18.7■□□□□ 0.58
VARS2-207ENST00000476162 CHRNDQ07001 517 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 CYB5R4Q7L1T6 521 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 CKAP2LQ8IYA6 745 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 PPP4R3BQ5MIZ7 849 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 ILDR1Q86SU0 546 aaPredicted RBP18.69■□□□□ 0.58
VARS2-207ENST00000476162 USP28Q96RU2 1077 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 RCOR1Q9UKL0 485 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 ZKSCAN5Q9Y2L8 839 aa18.69■□□□□ 0.58
VARS2-207ENST00000476162 KDM4AO75164 1064 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 KIF20AO95235 890 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 MBD4O95243 580 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 ADCY5O95622 1261 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 PTMAP06454 111 aaKnown RBP18.68■□□□□ 0.58
VARS2-207ENST00000476162 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 GTPBP4Q9BZE4 634 aaKnown RBP18.68■□□□□ 0.58
VARS2-207ENST00000476162 CLSTN2Q9H4D0 955 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 B4E1Z4 1266 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
VARS2-207ENST00000476162 CPLX1O14810 134 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 TOM1O60784 492 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
VARS2-207ENST00000476162 ORC3Q9UBD5 711 aaPredicted RBP18.68■□□□□ 0.58
VARS2-207ENST00000476162 ANGEL1Q9UNK9 670 aaKnown RBP18.68■□□□□ 0.58
VARS2-207ENST00000476162 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
VARS2-207ENST00000476162 TYRO3Q06418 890 aa18.67■□□□□ 0.58
VARS2-207ENST00000476162 ALX1Q15699 326 aa18.67■□□□□ 0.58
VARS2-207ENST00000476162 ERFEQ4G0M1 354 aa18.67■□□□□ 0.58
VARS2-207ENST00000476162 IFNL3Q8IZI9 196 aa18.67■□□□□ 0.58
VARS2-207ENST00000476162 ZNF396Q96N95 335 aaPredicted RBP18.67■□□□□ 0.58
VARS2-207ENST00000476162 EPB41L4AQ9HCS5 686 aaPredicted RBP18.67■□□□□ 0.58
VARS2-207ENST00000476162 INCENPQ9NQS7 918 aa18.67■□□□□ 0.58
VARS2-207ENST00000476162 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 C3orf67Q6ZVT6 689 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 C8orf76Q96K31 380 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 CDC5LQ99459 802 aaKnown RBP18.66■□□□□ 0.58
VARS2-207ENST00000476162 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 NEDD4P46934 1319 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 SH2B2O14492 632 aaPredicted RBP18.66■□□□□ 0.58
VARS2-207ENST00000476162 RBM43Q6ZSC3 357 aaKnown RBP18.66■□□□□ 0.58
VARS2-207ENST00000476162 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 NAPBQ9H115 298 aa18.66■□□□□ 0.58
VARS2-207ENST00000476162 PLCB2Q00722 1185 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 GJB4Q9NTQ9 266 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 COL4A1P02462 1669 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 FBXO18Q8NFZ0 1043 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 SENP2Q9HC62 589 aa18.65■□□□□ 0.58
VARS2-207ENST00000476162 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
VARS2-207ENST00000476162 GSG1L2A8MUP6 293 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 AP5Z1O43299 807 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 PRKAB2O43741 272 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 RXRAP19793 462 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.57
VARS2-207ENST00000476162 MPNDQ8N594 471 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 FAM200AQ8TCP9 573 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 LRP2BPQ9P2M1 347 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 ZMYM6O95789 1325 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 WTIPA6NIX2 430 aaPredicted RBP18.64■□□□□ 0.57
VARS2-207ENST00000476162 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.57
VARS2-207ENST00000476162 LCORLQ8N3X6 602 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms