RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 COL9A3Q14050 684 aaPredicted RBP24.29■■□□□ 1.48
ITGA4-207ENST00000476089 TOB2Q14106 344 aaPredicted RBP24.29■■□□□ 1.48
ITGA4-207ENST00000476089 SPTY2D1Q68D10 685 aaPredicted RBP24.29■■□□□ 1.48
ITGA4-207ENST00000476089 Q6ZUG5 572 aa24.29■■□□□ 1.48
ITGA4-207ENST00000476089 MASTLQ96GX5 879 aa24.29■■□□□ 1.48
ITGA4-207ENST00000476089 TMX4Q9H1E5 349 aaPredicted RBP24.29■■□□□ 1.48
ITGA4-207ENST00000476089 TPCN1Q9ULQ1 816 aa24.29■■□□□ 1.48
ITGA4-207ENST00000476089 MAGEB6P1A0A0J9YX57 407 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 TMED8Q6PL24 325 aaPredicted RBP24.28■■□□□ 1.48
ITGA4-207ENST00000476089 MIGA1Q8NAN2 632 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 NAPBQ9H115 298 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 ZMYM6O95789 1325 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 QSER1Q2KHR3 1735 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 LARGE1O95461 756 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 ME3Q16798 604 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 SLC51AQ86UW1 340 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 CCDC83Q8IWF9 413 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 TDRD7Q8NHU6 1098 aaKnown RBP24.28■■□□□ 1.48
ITGA4-207ENST00000476089 WDR66Q8TBY9 1149 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 ATP6V0A2Q9Y487 856 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 SLC4A4Q9Y6R1 1079 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 LAMA4Q16363 1823 aa24.28■■□□□ 1.48
ITGA4-207ENST00000476089 IGSF3O75054 1194 aa24.27■■□□□ 1.48
ITGA4-207ENST00000476089 MCM4P33991 863 aa24.27■■□□□ 1.48
ITGA4-207ENST00000476089 TRDNQ13061 729 aa24.27■■□□□ 1.48
ITGA4-207ENST00000476089 IFNL3Q8IZI9 196 aa24.27■■□□□ 1.48
ITGA4-207ENST00000476089 LCORLQ8N3X6 602 aa24.27■■□□□ 1.48
ITGA4-207ENST00000476089 SMC3Q9UQE7 1217 aa24.27■■□□□ 1.48
ITGA4-207ENST00000476089 C6orf229H3BNL8 230 aa24.26■■□□□ 1.47
ITGA4-207ENST00000476089 RALYLQ86SE5 291 aaKnown RBP24.26■■□□□ 1.47
ITGA4-207ENST00000476089 NCOA7Q8NI08 942 aa24.26■■□□□ 1.47
ITGA4-207ENST00000476089 TBC1D16Q8TBP0 767 aa24.26■■□□□ 1.47
ITGA4-207ENST00000476089 EXOSC10Q01780 885 aaKnown RBP24.26■■□□□ 1.47
ITGA4-207ENST00000476089 DEFB132Q7Z7B7 95 aa24.26■■□□□ 1.47
ITGA4-207ENST00000476089 NSUN4Q96CB9 384 aaKnown RBP24.25■■□□□ 1.47
ITGA4-207ENST00000476089 GPR101Q96P66 508 aaPredicted RBP24.25■■□□□ 1.47
ITGA4-207ENST00000476089 SALL1Q9NSC2 1324 aa24.25■■□□□ 1.47
ITGA4-207ENST00000476089 LRRC37AA6NMS7 1700 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 GSG1L2A8MUP6 293 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 H0YIN7 160 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 TDO2P48775 406 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 MECOMQ03112 1051 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 ZNF622Q969S3 477 aaKnown RBP eCLIP24.24■■□□□ 1.47
ITGA4-207ENST00000476089 POLLQ9UGP5 575 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 MCM5P33992 734 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 ADGRA1Q86SQ6 560 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 DZIP1Q86YF9 867 aaKnown RBP24.24■■□□□ 1.47
ITGA4-207ENST00000476089 C2CD5Q86YS7 1000 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 BRF1Q92994 677 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 LRRC2Q9BYS8 371 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 CD209Q9NNX6 404 aa24.24■■□□□ 1.47
ITGA4-207ENST00000476089 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
ITGA4-207ENST00000476089 PKP1Q13835 747 aa24.23■■□□□ 1.47
ITGA4-207ENST00000476089 NECAB1Q8N987 351 aa24.23■■□□□ 1.47
ITGA4-207ENST00000476089 EPB41L4AQ9HCS5 686 aaPredicted RBP24.23■■□□□ 1.47
ITGA4-207ENST00000476089 CCDC88AQ3V6T2 1871 aa24.22■■□□□ 1.47
ITGA4-207ENST00000476089 PRKAB2O43741 272 aa24.22■■□□□ 1.47
ITGA4-207ENST00000476089 LDHBP07195 334 aaKnown RBP24.22■■□□□ 1.47
ITGA4-207ENST00000476089 PRDX5P30044 214 aa24.22■■□□□ 1.47
ITGA4-207ENST00000476089 JAG2Q9Y219 1238 aa24.22■■□□□ 1.47
ITGA4-207ENST00000476089 IL1R1P14778 569 aa24.21■■□□□ 1.47
ITGA4-207ENST00000476089 MPNDQ8N594 471 aa24.21■■□□□ 1.47
ITGA4-207ENST00000476089 RIOK1Q9BRS2 568 aaKnown RBP24.21■■□□□ 1.47
ITGA4-207ENST00000476089 STK3Q13188 491 aa24.21■■□□□ 1.47
ITGA4-207ENST00000476089 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
ITGA4-207ENST00000476089 CLEC17AQ6ZS10 378 aa24.21■■□□□ 1.47
ITGA4-207ENST00000476089 AGXT2Q9BYV1 514 aa24.21■■□□□ 1.47
ITGA4-207ENST00000476089 MAST2Q6P0Q8 1798 aa24.2■■□□□ 1.47
ITGA4-207ENST00000476089 COL11A2P13942 1736 aaPredicted RBP24.2■■□□□ 1.47
ITGA4-207ENST00000476089 GOLGA6L22H0YM25 854 aa24.2■■□□□ 1.46
ITGA4-207ENST00000476089 CHST3Q7LGC8 479 aa24.2■■□□□ 1.46
ITGA4-207ENST00000476089 MB21D2Q8IYB1 491 aaPredicted RBP24.2■■□□□ 1.46
ITGA4-207ENST00000476089 FBXL16Q8N461 479 aa24.2■■□□□ 1.46
ITGA4-207ENST00000476089 WDR19Q8NEZ3 1342 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 PRC1O43663 620 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 GSTO1P78417 241 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 DPP8Q6V1X1 898 aaPredicted RBP24.19■■□□□ 1.46
ITGA4-207ENST00000476089 ZNF384Q8TF68 577 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 WDR33Q9C0J8 1336 aaKnown RBP24.19■■□□□ 1.46
ITGA4-207ENST00000476089 BRD1O95696 1058 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 PTMSP20962 102 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 GJB2P29033 226 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 TBC1D10CQ8IV04 446 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 CHMP4CQ96CF2 233 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 ZC3H12CQ9C0D7 883 aaKnown RBP24.19■■□□□ 1.46
ITGA4-207ENST00000476089 NBPF3Q9H094 633 aa24.19■■□□□ 1.46
ITGA4-207ENST00000476089 LTBP1Q14766 1721 aa24.18■■□□□ 1.46
ITGA4-207ENST00000476089 DYNLL1P63167 89 aaKnown RBP24.18■■□□□ 1.46
ITGA4-207ENST00000476089 ST3GAL1Q11201 340 aa24.18■■□□□ 1.46
ITGA4-207ENST00000476089 CCDC125Q86Z20 511 aa24.18■■□□□ 1.46
ITGA4-207ENST00000476089 CNNM2Q9H8M5 875 aa24.18■■□□□ 1.46
ITGA4-207ENST00000476089 ZDHHC9Q9Y397 364 aa24.18■■□□□ 1.46
ITGA4-207ENST00000476089 APOBRQ0VD83 1088 aa24.17■■□□□ 1.46
ITGA4-207ENST00000476089 SDR42E1Q8WUS8 393 aa24.17■■□□□ 1.46
ITGA4-207ENST00000476089 GTF3C6Q969F1 213 aa24.17■■□□□ 1.46
ITGA4-207ENST00000476089 CRNKL1Q9BZJ0 848 aaKnown RBP24.17■■□□□ 1.46
ITGA4-207ENST00000476089 COA1Q9GZY4 146 aa24.17■■□□□ 1.46
ITGA4-207ENST00000476089 DUOX1Q9NRD9 1551 aa24.17■■□□□ 1.46
ITGA4-207ENST00000476089 BAG4O95429 457 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms