RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 CCDC150Q8NCX0 1101 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
RPGR-206ENST00000474584 NRDCO43847 1150 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 SMC2O95347 1197 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
RPGR-206ENST00000474584 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPGR-206ENST00000474584 ZNF202O95125 648 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 TRDNQ13061 729 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
RPGR-206ENST00000474584 GPAA1O43292 621 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 ZAP70P43403 619 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 ANTXR2P58335 489 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 NLRP12P59046 1061 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 KIF23Q02241 960 aaPredicted RBP16.33■□□□□ 0.2
RPGR-206ENST00000474584 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
RPGR-206ENST00000474584 OGFRQ9NZT2 677 aa16.33■□□□□ 0.2
RPGR-206ENST00000474584 NEDD4P46934 1319 aa16.32■□□□□ 0.2
RPGR-206ENST00000474584 CMA1P23946 247 aa16.32■□□□□ 0.2
RPGR-206ENST00000474584 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
RPGR-206ENST00000474584 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
RPGR-206ENST00000474584 SCARF1Q14162 830 aa16.32■□□□□ 0.2
RPGR-206ENST00000474584 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
RPGR-206ENST00000474584 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
RPGR-206ENST00000474584 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
RPGR-206ENST00000474584 CDKL5O76039 1030 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 PFKFB1P16118 471 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 SFPQP23246 707 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPGR-206ENST00000474584 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 AKAP11Q9UKA4 1901 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 WDR17Q8IZU2 1322 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 ECM29Q5VYK3 1845 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 BIN1O00499 593 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 TMC6Q7Z403 805 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
RPGR-206ENST00000474584 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 NAA30Q147X3 362 aaPredicted RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 ERO1AQ96HE7 468 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 GJB4Q9NTQ9 266 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 ZNF215Q9UL58 517 aaPredicted RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 MYH3P11055 1940 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 KCNJ6P48051 423 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 JMYQ8N9B5 988 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
RPGR-206ENST00000474584 PLA2G12BQ9BX93 195 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 SHANK3Q9BYB0 1731 aa16.3■□□□□ 0.2
RPGR-206ENST00000474584 MROH7-TTC4A0A0A0MT08 1334 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 ATRNO75882 1429 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
RPGR-206ENST00000474584 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
RPGR-206ENST00000474584 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
RPGR-206ENST00000474584 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 IKBKBO14920 756 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 SYKP43405 635 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 METAP2P50579 478 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPGR-206ENST00000474584 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
RPGR-206ENST00000474584 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 PI16Q6UXB8 463 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
RPGR-206ENST00000474584 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
RPGR-206ENST00000474584 STRCP1A6NGW2 1772 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 CHD4Q14839 1912 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 SLU7O95391 586 aaKnown RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 TTF1Q15361 905 aaPredicted RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 ALG1Q9BT22 464 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 CSF1RP07333 972 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 NCAPHQ15003 741 aa16.28■□□□□ 0.2
RPGR-206ENST00000474584 E4F1Q66K89 784 aaPredicted RBP16.28■□□□□ 0.2
RPGR-206ENST00000474584 PPP6R2O75170 966 aa16.27■□□□□ 0.2
RPGR-206ENST00000474584 TUBB4AP04350 444 aa16.27■□□□□ 0.2
RPGR-206ENST00000474584 IL2RBP14784 551 aa16.27■□□□□ 0.2
RPGR-206ENST00000474584 ADD2P35612 726 aa16.27■□□□□ 0.2
RPGR-206ENST00000474584 MCAMP43121 646 aa16.27■□□□□ 0.2
RPGR-206ENST00000474584 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
RPGR-206ENST00000474584 WDHD1O75717 1129 aaPredicted RBP16.26■□□□□ 0.19
RPGR-206ENST00000474584 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
RPGR-206ENST00000474584 SLC9C2Q5TAH2 1124 aa16.26■□□□□ 0.19
RPGR-206ENST00000474584 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms