RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 PIBF1Q8WXW3 757 aa20.4■□□□□ 0.86
RRP1-202ENST00000471909 STRBPQ96SI9 672 aaKnown RBP20.4■□□□□ 0.86
RRP1-202ENST00000471909 RC3H1Q5TC82 1133 aaKnown RBP20.4■□□□□ 0.86
RRP1-202ENST00000471909 APPP05067 770 aa20.39■□□□□ 0.85
RRP1-202ENST00000471909 MAP3K12Q12852 859 aa20.39■□□□□ 0.85
RRP1-202ENST00000471909 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
RRP1-202ENST00000471909 SPATA31A6Q5VVP1 1343 aa20.39■□□□□ 0.85
RRP1-202ENST00000471909 SALL1Q9NSC2 1324 aa20.39■□□□□ 0.85
RRP1-202ENST00000471909 H3BQV1 296 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 RGL2O15211 777 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 RPS6KA4O75676 772 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 RESTQ13127 1097 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 MPNDQ8N594 471 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 PRIMPOLQ96LW4 560 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 LETM1O95202 739 aaPredicted RBP20.38■□□□□ 0.85
RRP1-202ENST00000471909 HMGN5P82970 282 aaKnown RBP20.38■□□□□ 0.85
RRP1-202ENST00000471909 RALYLQ86SE5 291 aaKnown RBP20.38■□□□□ 0.85
RRP1-202ENST00000471909 ANKRD18AQ8IVF6 992 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 TFIP11Q9UBB9 837 aaKnown RBP20.38■□□□□ 0.85
RRP1-202ENST00000471909 SRP68Q9UHB9 627 aaKnown RBP20.38■□□□□ 0.85
RRP1-202ENST00000471909 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 DENND2AQ9ULE3 1009 aa20.38■□□□□ 0.85
RRP1-202ENST00000471909 ADCY5O95622 1261 aa20.37■□□□□ 0.85
RRP1-202ENST00000471909 TBC1D10CQ8IV04 446 aa20.37■□□□□ 0.85
RRP1-202ENST00000471909 ZNF830Q96NB3 372 aaPredicted RBP20.37■□□□□ 0.85
RRP1-202ENST00000471909 ELP1O95163 1332 aa20.37■□□□□ 0.85
RRP1-202ENST00000471909 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
RRP1-202ENST00000471909 PPFIA3O75145 1194 aa20.37■□□□□ 0.85
RRP1-202ENST00000471909 NOLC1Q14978 699 aaKnown RBP eCLIP20.37■□□□□ 0.85
RRP1-202ENST00000471909 NKX2-3Q8TAU0 364 aa20.37■□□□□ 0.85
RRP1-202ENST00000471909 GNPATO15228 680 aa20.36■□□□□ 0.85
RRP1-202ENST00000471909 SLC10A5Q5PT55 438 aa20.36■□□□□ 0.85
RRP1-202ENST00000471909 SMAP1Q8IYB5 467 aaPredicted RBP20.36■□□□□ 0.85
RRP1-202ENST00000471909 THSD7AQ9UPZ6 1657 aa20.36■□□□□ 0.85
RRP1-202ENST00000471909 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
RRP1-202ENST00000471909 SCAND2PQ9GZW5 306 aaPredicted RBP20.36■□□□□ 0.85
RRP1-202ENST00000471909 BSDC1Q9NW68 430 aaPredicted RBP20.36■□□□□ 0.85
RRP1-202ENST00000471909 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
RRP1-202ENST00000471909 MBD4O95243 580 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 AMIGO3Q86WK7 504 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 WDR19Q8NEZ3 1342 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 BTAF1O14981 1849 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 KLF18A0A0U1RQI7 1052 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 NAA16Q6N069 864 aaPredicted RBP20.35■□□□□ 0.85
RRP1-202ENST00000471909 ZSCAN16Q9H4T2 348 aaPredicted RBP20.35■□□□□ 0.85
RRP1-202ENST00000471909 EPB41L4AQ9HCS5 686 aaPredicted RBP20.35■□□□□ 0.85
RRP1-202ENST00000471909 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
RRP1-202ENST00000471909 PATL2C9JE40 543 aaKnown RBP20.34■□□□□ 0.85
RRP1-202ENST00000471909 FOSBP53539 338 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 TRDNQ13061 729 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 ALX1Q15699 326 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 CELF1Q92879 486 aaKnown RBP20.34■□□□□ 0.85
RRP1-202ENST00000471909 SPATA32Q96LK8 384 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 CCDC94Q9BW85 323 aaPredicted RBP20.34■□□□□ 0.85
RRP1-202ENST00000471909 TTC12Q9H892 705 aaPredicted RBP20.34■□□□□ 0.85
RRP1-202ENST00000471909 ARMT1Q9H993 441 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 PRDM4Q9UKN5 801 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 IQSEC3Q9UPP2 1182 aaPredicted RBP20.34■□□□□ 0.85
RRP1-202ENST00000471909 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 LEO1Q8WVC0 666 aaPredicted RBP20.34■□□□□ 0.85
RRP1-202ENST00000471909 CHMP4CQ96CF2 233 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 MINPP1Q9UNW1 487 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 KIF3AQ9Y496 699 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 DOCK2Q92608 1830 aa20.34■□□□□ 0.85
RRP1-202ENST00000471909 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
RRP1-202ENST00000471909 GYG1P46976 350 aa20.33■□□□□ 0.85
RRP1-202ENST00000471909 IFNL3Q8IZI9 196 aa20.33■□□□□ 0.85
RRP1-202ENST00000471909 ZPR1O75312 459 aa20.33■□□□□ 0.84
RRP1-202ENST00000471909 CYB5R4Q7L1T6 521 aa20.33■□□□□ 0.84
RRP1-202ENST00000471909 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.84
RRP1-202ENST00000471909 NHSQ6T4R5 1651 aa20.33■□□□□ 0.84
RRP1-202ENST00000471909 ZMYM6O95789 1325 aa20.33■□□□□ 0.84
RRP1-202ENST00000471909 GOLGA8BA8MQT2 603 aa20.32■□□□□ 0.84
RRP1-202ENST00000471909 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
RRP1-202ENST00000471909 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
RRP1-202ENST00000471909 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
RRP1-202ENST00000471909 CARMIL3Q8ND23 1372 aa20.32■□□□□ 0.84
RRP1-202ENST00000471909 GSG1L2A8MUP6 293 aa20.32■□□□□ 0.84
RRP1-202ENST00000471909 NBPF5PQ86XG9 351 aaPredicted RBP20.32■□□□□ 0.84
RRP1-202ENST00000471909 LRP2BPQ9P2M1 347 aa20.32■□□□□ 0.84
RRP1-202ENST00000471909 RAB11FIP4Q86YS3 637 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 LCORLQ8N3X6 602 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 ARHGEF1Q92888 912 aaKnown RBP20.31■□□□□ 0.84
RRP1-202ENST00000471909 NEDD4P46934 1319 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 TAF1P21675 1872 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 PRKAB2O43741 272 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 KDM4AO75164 1064 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 GTF2F1P35269 517 aaKnown RBP eCLIP20.31■□□□□ 0.844e-10■□□□□ 8.8
RRP1-202ENST00000471909 ADD1P35611 737 aaKnown RBP20.31■□□□□ 0.84
RRP1-202ENST00000471909 NAPBQ9H115 298 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 INCENPQ9NQS7 918 aa20.31■□□□□ 0.84
RRP1-202ENST00000471909 B4E1Z4 1266 aa20.3■□□□□ 0.84
RRP1-202ENST00000471909 LIG1P18858 919 aa20.3■□□□□ 0.84
RRP1-202ENST00000471909 GIMAP6Q6P9H5 292 aa20.3■□□□□ 0.84
RRP1-202ENST00000471909 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
RRP1-202ENST00000471909 CCDC24Q8N4L8 307 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms