RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ECM1Q16610 540 aa6.83□□□□□ -1.32
PRPF40A-207ENST00000471701 ZNF423Q2M1K9 1284 aa6.83□□□□□ -1.32
PRPF40A-207ENST00000471701 KIAA0319Q5VV43 1072 aa6.83□□□□□ -1.32
PRPF40A-207ENST00000471701 FBXL6Q8N531 539 aa6.83□□□□□ -1.32
PRPF40A-207ENST00000471701 TCF12Q99081 682 aa6.83□□□□□ -1.32
PRPF40A-207ENST00000471701 KIAA1324LA8MWY0 1029 aaPredicted RBP6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 TIAF1O95411 115 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 DLGAP3O95886 979 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 MAOBP27338 520 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 ARHGAP4P98171 946 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 USPL1Q5W0Q7 1092 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 FBLIM1Q8WUP2 373 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 CORO1BQ9BR76 489 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 OSBPL1AQ9BXW6 950 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 LEMD3Q9Y2U8 911 aa6.82□□□□□ -1.32
PRPF40A-207ENST00000471701 GADD45BO75293 160 aaPredicted RBP6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 WNT11O96014 354 aa6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 IRAK1P51617 712 aa6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 ORC1Q13415 861 aa6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 TXNDC2Q86VQ3 553 aa6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 DNAJC25Q9H1X3 360 aa6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
PRPF40A-207ENST00000471701 GP2P55259 537 aaKnown RBP6.8□□□□□ -1.32
PRPF40A-207ENST00000471701 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
PRPF40A-207ENST00000471701 DYMQ7RTS9 669 aa6.8□□□□□ -1.32
PRPF40A-207ENST00000471701 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
PRPF40A-207ENST00000471701 NPHS2Q9NP85 383 aa6.8□□□□□ -1.32
PRPF40A-207ENST00000471701 EIF1AYO14602 144 aaKnown RBP6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 MAP7Q14244 749 aa6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 AKAP4Q5JQC9 854 aa6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 DTX1Q86Y01 620 aa6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 RETREG2Q8NC44 543 aa6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 C2CD4AQ8NCU7 369 aaPredicted RBP6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 CCDC74AQ96AQ1 378 aa6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
PRPF40A-207ENST00000471701 F13BP05160 661 aa6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 PTPN12Q05209 780 aaKnown RBP6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 DUSP27Q5VZP5 1158 aa6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 TBC1D32Q96NH3 1257 aa6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 TRAK1Q9UPV9 953 aa6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 COL17A1Q9UMD9 1497 aaPredicted RBP6.78□□□□□ -1.32
PRPF40A-207ENST00000471701 B3GALT4O96024 378 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 ADH5P11766 374 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 SPINK2P20155 84 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 ITPKAP23677 461 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 PDE3AQ14432 1141 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 CPSF6Q16630 551 aaKnown RBP eCLIP6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 MCTP1Q6DN14 999 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 EZH1Q92800 747 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 OAS3Q9Y6K5 1087 aaKnown RBP6.77□□□□□ -1.33
PRPF40A-207ENST00000471701 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 PAX4O43316 350 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 NFICP08651 508 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 ASPAP45381 313 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 HNRNPUQ00839 825 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 AP3B2Q13367 1082 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 RPS26P11Q5JNZ5 115 aaPredicted RBP6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 CSRNP1Q96S65 589 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 NLRP2Q9NX02 1062 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 BIN2Q9UBW5 565 aaPredicted RBP6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 ACTL7BQ9Y614 415 aa6.76□□□□□ -1.33
PRPF40A-207ENST00000471701 CYP26A1O43174 497 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 CTSBP07858 339 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 SLFN14P0C7P3 912 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 FOSL1P15407 271 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 RAB6AP20340 208 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 HOXA10P31260 410 aaPredicted RBP6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 CYP27A1Q02318 531 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 RBCK1Q9BYM8 510 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 PRKAG2Q9UGJ0 569 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 ANGEL1Q9UNK9 670 aaKnown RBP6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 AP4E1Q9UPM8 1137 aa6.75□□□□□ -1.33
PRPF40A-207ENST00000471701 GPR182O15218 404 aa6.74□□□□□ -1.33
PRPF40A-207ENST00000471701 AOC2O75106 756 aa6.74□□□□□ -1.33
PRPF40A-207ENST00000471701 ZNF157P51786 506 aaPredicted RBP6.74□□□□□ -1.33
PRPF40A-207ENST00000471701 DTHD1Q6ZMT9 781 aa6.74□□□□□ -1.33
PRPF40A-207ENST00000471701 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
PRPF40A-207ENST00000471701 SOWAHDA6NJG2 315 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 ADAMTS4O75173 837 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 ECEL1O95672 775 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 TAL1P17542 331 aaPredicted RBP6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 ADMP35318 185 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 PLCB3Q01970 1234 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 PPP2R3AQ06190 1150 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 PRPF40BQ6NWY9 871 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 SHISA5Q8N114 240 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 EPS8L3Q8TE67 593 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 ALKBH8Q96BT7 664 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 ABCB6Q9NP58 842 aa6.73□□□□□ -1.33
PRPF40A-207ENST00000471701 TXKP42681 527 aa6.72□□□□□ -1.33
PRPF40A-207ENST00000471701 GRM2Q14416 872 aa6.72□□□□□ -1.33
PRPF40A-207ENST00000471701 ZC3H12CQ9C0D7 883 aaKnown RBP6.72□□□□□ -1.33
PRPF40A-207ENST00000471701 SEMA6CQ9H3T2 930 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms