RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 NLRP12P59046 1061 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 PTPN12Q05209 780 aaKnown RBP4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 NFIAQ12857 509 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 USPL1Q5W0Q7 1092 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 OGFOD2Q6N063 350 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 PRPF40BQ6NWY9 871 aaKnown RBP4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 UBASH3BQ8TF42 649 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 RUSC1Q9BVN2 902 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 EHD4Q9H223 541 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 CLEC4MQ9H2X3 399 aaPredicted RBP4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 NPHS2Q9NP85 383 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 TRAK1Q9UPV9 953 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 IVNS1ABPQ9Y6Y0 642 aa4.48□□□□□ -1.69
NCKAP1-203ENST00000471640 METTL12A8MUP2 240 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 JUNBP17275 347 aaPredicted RBP4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 ITPKAP23677 461 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 MAPK1P28482 360 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 GRIA4P48058 902 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 PCDH1Q08174 1060 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 HP1BP3Q5SSJ5 553 aaPredicted RBP4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 RNF43Q68DV7 783 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 TMC7Q7Z402 723 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 ZSCAN29Q8IWY8 852 aaPredicted RBP4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 DDX54Q8TDD1 881 aaKnown RBP4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 CCDC74AQ96AQ1 378 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 FAM46AQ96IP4 442 aaKnown RBP4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 DBNDD2Q9BQY9 259 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 HIF3AQ9Y2N7 669 aa4.47□□□□□ -1.69
NCKAP1-203ENST00000471640 LOC100289279A0A1B0GTE1 492 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 SART1O43290 800 aaKnown RBP4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 GADD45BO75293 160 aaPredicted RBP4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 FBLN7Q53RD9 439 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 HGSNATQ68CP4 663 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 FDX2Q6P4F2 183 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 UTP4Q969X6 686 aaKnown RBP4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 MYRFLQ96LU7 910 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 UBL7Q96S82 380 aaPredicted RBP4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 USP26Q9BXU7 913 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 SUGCTQ9HAC7 445 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 ZFYVE1Q9HBF4 777 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 ABCB6Q9NP58 842 aa4.46□□□□□ -1.7
NCKAP1-203ENST00000471640 PRR19A6NJB7 356 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 TREHO43280 583 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 B3GALT4O96024 378 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 CYP11A1P05108 521 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 PREPP48147 710 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 GSTM4Q03013 218 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 DSC3Q14574 896 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 SPRED3Q2MJR0 410 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 RPS26P11Q5JNZ5 115 aaPredicted RBP4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 ARMC10Q8N2F6 343 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 SMG8Q8ND04 991 aaKnown RBP4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 GIMAP7Q8NHV1 300 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 TMPRSS13Q9BYE2 586 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 NRSN2Q9GZP1 204 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 ZNF576Q9H609 170 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 CYP4F12Q9HCS2 524 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 NLRP2Q9NX02 1062 aa4.45□□□□□ -1.7
NCKAP1-203ENST00000471640 TMEM238LA0A1B0GVL6 79 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 ADAMTS4O75173 837 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 XRCC5P13010 732 aaKnown RBP4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 PLCB3Q01970 1234 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 ENOX2Q16206 610 aaKnown RBP4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 CPSF6Q16630 551 aaKnown RBP eCLIP4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 ZNF423Q2M1K9 1284 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 NUTM2GQ5VZR2 741 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 CLEC10AQ8IUN9 316 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 GLIS3Q8NEA6 775 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 FBF1Q8TES7 1133 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 FBXL18Q96ME1 805 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 ASB16Q96NS5 453 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 PPP4R2Q9NY27 417 aa4.44□□□□□ -1.7
NCKAP1-203ENST00000471640 PNMA6FA0A0J9YX94 578 aa4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 GAS2O43903 313 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 TIAF1O95411 115 aa4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 HNRNPUQ00839 825 aaKnown RBP eCLIP4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 FMR1Q06787 632 aaKnown RBP eCLIP4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 AP3B2Q13367 1082 aa4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 GRM2Q14416 872 aa4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 POU4F3Q15319 338 aa4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 EXOSC6Q5RKV6 272 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 FAM20CQ8IXL6 584 aa4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 EPS8L3Q8TE67 593 aaKnown RBP4.43□□□□□ -1.7
NCKAP1-203ENST00000471640 BMP3P12645 472 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 PDIA4P13667 645 aaKnown RBP4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 ALG1LQ6GMV1 187 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 DTHD1Q6ZMT9 781 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 CBLL1Q75N03 491 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 FAM83CQ9BQN1 747 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 CORO1BQ9BR76 489 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 TRIM56Q9BRZ2 755 aaKnown RBP4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 SRCIN1Q9C0H9 1055 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 C7orf69Q9H7B7 122 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 ANGEL1Q9UNK9 670 aaKnown RBP4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 SYNGAP1Q96PV0 1343 aa4.42□□□□□ -1.7
NCKAP1-203ENST00000471640 DBX1A6NMT0 343 aa4.41□□□□□ -1.7
NCKAP1-203ENST00000471640 GIPC1O14908 333 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms