RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
NCKAP1-203ENST00000471640 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
NCKAP1-203ENST00000471640 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
NCKAP1-203ENST00000471640 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
NCKAP1-203ENST00000471640 FOXD1Q16676 465 aa13.43□□□□□ -0.26
NCKAP1-203ENST00000471640 POTEDQ86YR6 584 aa13□□□□□ -0.33
NCKAP1-203ENST00000471640 MSH5O43196 834 aa12.86□□□□□ -0.35
NCKAP1-203ENST00000471640 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
NCKAP1-203ENST00000471640 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
NCKAP1-203ENST00000471640 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
NCKAP1-203ENST00000471640 ADRA2BP18089 450 aa12.16□□□□□ -0.46
NCKAP1-203ENST00000471640 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
NCKAP1-203ENST00000471640 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
NCKAP1-203ENST00000471640 MAPK8IP2Q13387 824 aaPredicted RBP11.25□□□□□ -0.61
NCKAP1-203ENST00000471640 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
NCKAP1-203ENST00000471640 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
NCKAP1-203ENST00000471640 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
NCKAP1-203ENST00000471640 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
NCKAP1-203ENST00000471640 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
NCKAP1-203ENST00000471640 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
NCKAP1-203ENST00000471640 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
NCKAP1-203ENST00000471640 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
NCKAP1-203ENST00000471640 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
NCKAP1-203ENST00000471640 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
NCKAP1-203ENST00000471640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.32□□□□□ -0.761e-6■□□□□ 8.9
NCKAP1-203ENST00000471640 POTEHQ6S545 545 aa10.16□□□□□ -0.78
NCKAP1-203ENST00000471640 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
NCKAP1-203ENST00000471640 DSG3P32926 999 aa10.03□□□□□ -0.8
NCKAP1-203ENST00000471640 CAPN15O75808 1086 aa9.99□□□□□ -0.81
NCKAP1-203ENST00000471640 U3KPZ7 1027 aaPredicted RBP9.99□□□□□ -0.81
NCKAP1-203ENST00000471640 APLP2Q06481 763 aa9.94□□□□□ -0.82
NCKAP1-203ENST00000471640 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
NCKAP1-203ENST00000471640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
NCKAP1-203ENST00000471640 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
NCKAP1-203ENST00000471640 ZNF219Q9P2Y4 722 aaPredicted RBP9.82□□□□□ -0.84
NCKAP1-203ENST00000471640 TRHP20396 242 aaPredicted RBP9.71□□□□□ -0.86
NCKAP1-203ENST00000471640 RBM42Q9BTD8 480 aaKnown RBP9.71□□□□□ -0.86
NCKAP1-203ENST00000471640 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
NCKAP1-203ENST00000471640 SLC4A2P04920 1241 aa9.66□□□□□ -0.86
NCKAP1-203ENST00000471640 ABCB7O75027 752 aa9.63□□□□□ -0.87
NCKAP1-203ENST00000471640 KCNA4P22459 653 aa9.63□□□□□ -0.87
NCKAP1-203ENST00000471640 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.89
NCKAP1-203ENST00000471640 POLA2Q14181 598 aa9.42□□□□□ -0.9
NCKAP1-203ENST00000471640 MYCNP04198 464 aaPredicted RBP9.39□□□□□ -0.91
NCKAP1-203ENST00000471640 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
NCKAP1-203ENST00000471640 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
NCKAP1-203ENST00000471640 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-203ENST00000471640 REM2Q8IYK8 340 aaPredicted RBP9.21□□□□□ -0.94
NCKAP1-203ENST00000471640 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
NCKAP1-203ENST00000471640 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
NCKAP1-203ENST00000471640 HAX1O00165 279 aa9.15□□□□□ -0.94
NCKAP1-203ENST00000471640 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.953e-9■□□□□ 9.2
NCKAP1-203ENST00000471640 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
NCKAP1-203ENST00000471640 PITPNM1O00562 1244 aa9.06□□□□□ -0.96
NCKAP1-203ENST00000471640 OSCARQ8IYS5 282 aa9.05□□□□□ -0.96
NCKAP1-203ENST00000471640 ATF5Q9Y2D1 282 aaPredicted RBP9.02□□□□□ -0.97
NCKAP1-203ENST00000471640 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
NCKAP1-203ENST00000471640 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
NCKAP1-203ENST00000471640 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
NCKAP1-203ENST00000471640 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
NCKAP1-203ENST00000471640 FBLN2P98095 1184 aa8.91□□□□□ -0.98
NCKAP1-203ENST00000471640 SPDYE1Q8NFV5 336 aaPredicted RBP8.9□□□□□ -0.98
NCKAP1-203ENST00000471640 EVX2Q03828 476 aa8.88□□□□□ -0.99
NCKAP1-203ENST00000471640 PRKAR2AP13861 404 aaKnown RBP8.86□□□□□ -0.99
NCKAP1-203ENST00000471640 ZBTB22O15209 634 aa8.85□□□□□ -0.99
NCKAP1-203ENST00000471640 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
NCKAP1-203ENST00000471640 CLEC11AQ9Y240 323 aa8.8□□□□□ -1
NCKAP1-203ENST00000471640 CLCN6P51797 869 aa8.79□□□□□ -1
NCKAP1-203ENST00000471640 LHX8Q68G74 356 aa8.78□□□□□ -1
NCKAP1-203ENST00000471640 GABBR2O75899 941 aa8.77□□□□□ -1.01
NCKAP1-203ENST00000471640 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
NCKAP1-203ENST00000471640 SSUH2Q9Y2M2 353 aa8.75□□□□□ -1.01
NCKAP1-203ENST00000471640 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
NCKAP1-203ENST00000471640 CSRNP3Q8WYN3 585 aa8.71□□□□□ -1.02
NCKAP1-203ENST00000471640 PRR29P0C7W0 189 aa8.68□□□□□ -1.02
NCKAP1-203ENST00000471640 MKRN4PQ13434 485 aaPredicted RBP8.63□□□□□ -1.03
NCKAP1-203ENST00000471640 CHADLQ6NUI6 762 aa8.59□□□□□ -1.03
NCKAP1-203ENST00000471640 PABPN1Q86U42 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
NCKAP1-203ENST00000471640 CD44P16070 742 aaKnown RBP8.56□□□□□ -1.04
NCKAP1-203ENST00000471640 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
NCKAP1-203ENST00000471640 DCBLD2Q96PD2 775 aa8.52□□□□□ -1.05
NCKAP1-203ENST00000471640 POTEIP0CG38 1075 aa8.51□□□□□ -1.05
NCKAP1-203ENST00000471640 ZNF579Q8NAF0 562 aaKnown RBP8.45□□□□□ -1.06
NCKAP1-203ENST00000471640 STAG3Q9UJ98 1225 aa8.44□□□□□ -1.06
NCKAP1-203ENST00000471640 PLSCR2Q9NRY7 297 aa8.43□□□□□ -1.06
NCKAP1-203ENST00000471640 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
NCKAP1-203ENST00000471640 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
NCKAP1-203ENST00000471640 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
NCKAP1-203ENST00000471640 OTUD5Q96G74 571 aa8.31□□□□□ -1.08
NCKAP1-203ENST00000471640 CREBZFQ9NS37 354 aa8.3□□□□□ -1.08
NCKAP1-203ENST00000471640 NPM1P06748 294 aaKnown RBP eCLIP8.28□□□□□ -1.08
NCKAP1-203ENST00000471640 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
NCKAP1-203ENST00000471640 POTEMA6NI47 508 aa8.26□□□□□ -1.09
NCKAP1-203ENST00000471640 MAMSTRQ6ZN01 415 aa8.24□□□□□ -1.09
NCKAP1-203ENST00000471640 C7P10643 843 aa8.22□□□□□ -1.09
NCKAP1-203ENST00000471640 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
NCKAP1-203ENST00000471640 POTEB2H3BUK9 544 aa8.21□□□□□ -1.1
NCKAP1-203ENST00000471640 SLC39A7Q92504 469 aa8.2□□□□□ -1.1
NCKAP1-203ENST00000471640 ASTLQ6HA08 431 aaPredicted RBP8.18□□□□□ -1.1
NCKAP1-203ENST00000471640 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms