RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ZDHHC13Q8IUH4 622 aa6.13□□□□□ -1.43
COPS3-206ENST00000471414 EPS8L3Q8TE67 593 aaKnown RBP6.13□□□□□ -1.43
COPS3-206ENST00000471414 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 BMP3P12645 472 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 FMR1Q06787 632 aaKnown RBP eCLIP6.12□□□□□ -1.43
COPS3-206ENST00000471414 ENOX2Q16206 610 aaKnown RBP6.12□□□□□ -1.43
COPS3-206ENST00000471414 NUTM2GQ5VZR2 741 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 BEND4Q6ZU67 534 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 C2CD4AQ8NCU7 369 aaPredicted RBP6.12□□□□□ -1.43
COPS3-206ENST00000471414 TMC1Q8TDI8 760 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 USP26Q9BXU7 913 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 CYP4F12Q9HCS2 524 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 TRAK1Q9UPV9 953 aa6.12□□□□□ -1.43
COPS3-206ENST00000471414 SYNGAP1Q96PV0 1343 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 SCO2A0A1W2PP80 73 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 PRR19A6NJB7 356 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 KIAA1324LA8MWY0 1029 aaPredicted RBP6.11□□□□□ -1.43
COPS3-206ENST00000471414 ECEL1O95672 775 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 CYP11A1P05108 521 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 MAOBP27338 520 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 FAAP100Q0VG06 881 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 EZH1Q92800 747 aaPredicted RBP6.11□□□□□ -1.43
COPS3-206ENST00000471414 DBNDD2Q9BQY9 259 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 GSX1Q9H4S2 264 aaPredicted RBP6.11□□□□□ -1.43
COPS3-206ENST00000471414 BIN2Q9UBW5 565 aaPredicted RBP6.11□□□□□ -1.43
COPS3-206ENST00000471414 IVNS1ABPQ9Y6Y0 642 aa6.11□□□□□ -1.43
COPS3-206ENST00000471414 SART1O43290 800 aaKnown RBP6.1□□□□□ -1.43
COPS3-206ENST00000471414 ADH5P11766 374 aa6.1□□□□□ -1.43
COPS3-206ENST00000471414 SOX4Q06945 474 aaPredicted RBP6.1□□□□□ -1.43
COPS3-206ENST00000471414 SGO2Q562F6 1265 aa6.1□□□□□ -1.43
COPS3-206ENST00000471414 PI16Q6UXB8 463 aa6.1□□□□□ -1.43
COPS3-206ENST00000471414 MED26O95402 600 aa6.09□□□□□ -1.43
COPS3-206ENST00000471414 TGFB1P01137 390 aa6.09□□□□□ -1.43
COPS3-206ENST00000471414 DRD2P14416 443 aa6.09□□□□□ -1.43
COPS3-206ENST00000471414 MAP4P27816 1152 aaKnown RBP6.09□□□□□ -1.43
COPS3-206ENST00000471414 MAPK1P28482 360 aa6.09□□□□□ -1.43
COPS3-206ENST00000471414 POU4F3Q15319 338 aa6.09□□□□□ -1.43
COPS3-206ENST00000471414 ASB16Q96NS5 453 aa6.09□□□□□ -1.43
COPS3-206ENST00000471414 GADD45BO75293 160 aaPredicted RBP6.08□□□□□ -1.44
COPS3-206ENST00000471414 PLCB3Q01970 1234 aa6.08□□□□□ -1.44
COPS3-206ENST00000471414 AP3B2Q13367 1082 aa6.08□□□□□ -1.44
COPS3-206ENST00000471414 HP1BP3Q5SSJ5 553 aaPredicted RBP6.08□□□□□ -1.44
COPS3-206ENST00000471414 CDPF1Q6NVV7 123 aa6.08□□□□□ -1.44
COPS3-206ENST00000471414 C12orf50Q8NA57 414 aaPredicted RBP6.08□□□□□ -1.44
COPS3-206ENST00000471414 C3orf58Q8NDZ4 430 aa6.08□□□□□ -1.44
COPS3-206ENST00000471414 BCO2Q9BYV7 579 aa6.08□□□□□ -1.44
COPS3-206ENST00000471414 ZFYVE1Q9HBF4 777 aa6.08□□□□□ -1.44
COPS3-206ENST00000471414 PNMA6FA0A0J9YX94 578 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 GAS2O43903 313 aaKnown RBP6.07□□□□□ -1.44
COPS3-206ENST00000471414 XRCC5P13010 732 aaKnown RBP6.07□□□□□ -1.44
COPS3-206ENST00000471414 SPINK2P20155 84 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 SHKBP1Q8TBC3 707 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 DDX54Q8TDD1 881 aaKnown RBP6.07□□□□□ -1.44
COPS3-206ENST00000471414 FBF1Q8TES7 1133 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 GATA6Q92908 595 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 KCNF1Q9H3M0 494 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 PCDHGC5Q9Y5F6 944 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 ACTL7BQ9Y614 415 aa6.07□□□□□ -1.44
COPS3-206ENST00000471414 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.06□□□□□ -1.44
COPS3-206ENST00000471414 SEZ6L2Q6UXD5 910 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 PDZD3Q86UT5 571 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 ANKRD24Q8TF21 1146 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 CORO1BQ9BR76 489 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 WDR18Q9BV38 432 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 ACSS3Q9H6R3 686 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 CACNA2D2Q9NY47 1150 aa6.06□□□□□ -1.44
COPS3-206ENST00000471414 COBLO75128 1261 aa6.05□□□□□ -1.44
COPS3-206ENST00000471414 CPSF6Q16630 551 aaKnown RBP eCLIP6.05□□□□□ -1.44
COPS3-206ENST00000471414 NXPE4Q6UWF7 544 aa6.05□□□□□ -1.44
COPS3-206ENST00000471414 FBLIM1Q8WUP2 373 aa6.05□□□□□ -1.44
COPS3-206ENST00000471414 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
COPS3-206ENST00000471414 CCDC86Q9H6F5 360 aaKnown RBP6.05□□□□□ -1.44
COPS3-206ENST00000471414 FAM105AQ9NUU6 356 aa6.05□□□□□ -1.44
COPS3-206ENST00000471414 NLRP2Q9NX02 1062 aa6.05□□□□□ -1.44
COPS3-206ENST00000471414 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.04□□□□□ -1.44
COPS3-206ENST00000471414 FAM95CA0A1B0GW59 222 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 PATL2C9JE40 543 aaKnown RBP6.04□□□□□ -1.44
COPS3-206ENST00000471414 ZNF862O60290 1169 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 AOC2O75106 756 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 F13BP05160 661 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 SSTR4P31391 388 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 FCGRTP55899 365 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 KIF4BQ2VIQ3 1234 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 INTS5Q6P9B9 1019 aaKnown RBP6.04□□□□□ -1.44
COPS3-206ENST00000471414 DTHD1Q6ZMT9 781 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 DTX1Q86Y01 620 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 ZSCAN29Q8IWY8 852 aaPredicted RBP6.04□□□□□ -1.44
COPS3-206ENST00000471414 SHISA5Q8N114 240 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
COPS3-206ENST00000471414 MFSD14AQ96MC6 490 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 SETDB2Q96T68 719 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 OSBPL7Q9BZF2 842 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 SRCIN1Q9C0H9 1055 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 SEMA6CQ9H3T2 930 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 KRT82Q9NSB4 513 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 TMEM39AQ9NV64 488 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 PRKAG2Q9UGJ0 569 aa6.04□□□□□ -1.44
COPS3-206ENST00000471414 GSTP1P09211 210 aaKnown RBP6.03□□□□□ -1.44
COPS3-206ENST00000471414 ADMP35318 185 aa6.03□□□□□ -1.44
COPS3-206ENST00000471414 ZAR1Q86SH2 424 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms