RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 SUSD4Q5VX71 490 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
CDHR3-207ENST00000470188 WDR19Q8NEZ3 1342 aa23.49■■□□□ 1.35
CDHR3-207ENST00000470188 FGFR2P21802 821 aa23.49■■□□□ 1.35
CDHR3-207ENST00000470188 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
CDHR3-207ENST00000470188 TSC1Q92574 1164 aa23.49■■□□□ 1.35
CDHR3-207ENST00000470188 FTOQ9C0B1 505 aaKnown RBP eCLIP23.49■■□□□ 1.35
CDHR3-207ENST00000470188 ZNF532Q9HCE3 1301 aa23.49■■□□□ 1.35
CDHR3-207ENST00000470188 CERKQ8TCT0 537 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 USP28Q96RU2 1077 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 AP5Z1O43299 807 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 PDE6AP16499 860 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 ATP6V1AP38606 617 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 TRDNQ13061 729 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 HPS5Q9UPZ3 1129 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 SPATA31A1Q5TZJ5 1347 aa23.48■■□□□ 1.35
CDHR3-207ENST00000470188 MYH15Q9Y2K3 1946 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 APPP05067 770 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 CRKLP46109 303 aaKnown RBP23.47■■□□□ 1.35
CDHR3-207ENST00000470188 ANO6Q4KMQ2 910 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 UTP14AQ9BVJ6 771 aaKnown RBP23.47■■□□□ 1.35
CDHR3-207ENST00000470188 NBPF3Q9H094 633 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 KCNF1Q9H3M0 494 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 ADAMTS2O95450 1211 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 SLC5A1P13866 664 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 ACSBG1Q96GR2 724 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 WWC3Q9ULE0 1092 aa23.47■■□□□ 1.35
CDHR3-207ENST00000470188 THRAP3Q9Y2W1 955 aaKnown RBP23.47■■□□□ 1.35
CDHR3-207ENST00000470188 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
CDHR3-207ENST00000470188 PDCL2Q8N4E4 241 aa23.46■■□□□ 1.35
CDHR3-207ENST00000470188 ANKRD7Q92527 254 aa23.46■■□□□ 1.35
CDHR3-207ENST00000470188 CTIFO43310 598 aaKnown RBP23.45■■□□□ 1.35
CDHR3-207ENST00000470188 TBC1D10CQ8IV04 446 aa23.45■■□□□ 1.35
CDHR3-207ENST00000470188 CCAR1Q8IX12 1150 aaKnown RBP23.45■■□□□ 1.35
CDHR3-207ENST00000470188 MPHOSPH8Q99549 860 aa23.45■■□□□ 1.35
CDHR3-207ENST00000470188 TCRBV5S4A2TA0A5A2 114 aa23.45■■□□□ 1.34
CDHR3-207ENST00000470188 CPLX1O14810 134 aa23.45■■□□□ 1.34
CDHR3-207ENST00000470188 LUZP1Q86V48 1076 aa23.45■■□□□ 1.34
CDHR3-207ENST00000470188 SPATA5Q8NB90 893 aa23.45■■□□□ 1.34
CDHR3-207ENST00000470188 C8orf76Q96K31 380 aa23.45■■□□□ 1.34
CDHR3-207ENST00000470188 PYCARDQ9ULZ3 195 aa23.45■■□□□ 1.34
CDHR3-207ENST00000470188 LOC102724428A0A0B4J2F2 783 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 SIK1P57059 783 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 AIDAQ96BJ3 306 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 CBX8Q9HC52 389 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 ORC3Q9UBD5 711 aaPredicted RBP23.44■■□□□ 1.34
CDHR3-207ENST00000470188 RIOK3O14730 519 aaKnown RBP23.44■■□□□ 1.34
CDHR3-207ENST00000470188 CAMTA2O94983 1202 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 CBX1P83916 185 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 PARP10Q53GL7 1025 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 RAB11FIP4Q86YS3 637 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 DDX60Q8IY21 1712 aaKnown RBP23.44■■□□□ 1.34
CDHR3-207ENST00000470188 ARAP2Q8WZ64 1704 aa23.44■■□□□ 1.34
CDHR3-207ENST00000470188 SEC31BQ9NQW1 1179 aa23.43■■□□□ 1.34
CDHR3-207ENST00000470188 KIF20AO95235 890 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 CCDC73Q6ZRK6 1079 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 MARCH10Q8NA82 808 aaPredicted RBP23.42■■□□□ 1.34
CDHR3-207ENST00000470188 STRBPQ96SI9 672 aaKnown RBP23.42■■□□□ 1.34
CDHR3-207ENST00000470188 DENND2AQ9ULE3 1009 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 ANGEL1Q9UNK9 670 aaKnown RBP23.42■■□□□ 1.34
CDHR3-207ENST00000470188 ME1P48163 572 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 ITPK1Q13572 414 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 RASGRF1Q13972 1273 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 CCDC152Q4G0S7 254 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 OTUD7BQ6GQQ9 843 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 GOLPH3LQ9H4A5 285 aa23.42■■□□□ 1.34
CDHR3-207ENST00000470188 MYO5AQ9Y4I1 1855 aaKnown RBP23.42■■□□□ 1.34
CDHR3-207ENST00000470188 CTAGE5O15320 804 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 MAP3K12Q12852 859 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 CYB5R4Q7L1T6 521 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 FBXO18Q8NFZ0 1043 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 SNAP23O00161 211 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 SYCP1Q15431 976 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 RTEL1Q9NZ71 1219 aa23.41■■□□□ 1.34
CDHR3-207ENST00000470188 NRAPQ86VF7 1730 aa23.4■■□□□ 1.34
CDHR3-207ENST00000470188 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CDHR3-207ENST00000470188 ZHX1Q9UKY1 873 aaPredicted RBP23.4■■□□□ 1.34
CDHR3-207ENST00000470188 NIP7Q9Y221 180 aaKnown RBP eCLIP23.4■■□□□ 1.34
CDHR3-207ENST00000470188 SH2B2O14492 632 aaPredicted RBP23.4■■□□□ 1.34
CDHR3-207ENST00000470188 IGHMBP2P38935 993 aaKnown RBP23.4■■□□□ 1.34
CDHR3-207ENST00000470188 ZNF165P49910 485 aa23.4■■□□□ 1.34
CDHR3-207ENST00000470188 ALX1Q15699 326 aa23.4■■□□□ 1.34
CDHR3-207ENST00000470188 FEZ1Q99689 392 aa23.4■■□□□ 1.34
CDHR3-207ENST00000470188 DNAJC25Q9H1X3 360 aa23.4■■□□□ 1.34
CDHR3-207ENST00000470188 ZMYM6O95789 1325 aa23.39■■□□□ 1.34
CDHR3-207ENST00000470188 B4E1Z4 1266 aa23.39■■□□□ 1.33
CDHR3-207ENST00000470188 NTSR2O95665 410 aa23.39■■□□□ 1.33
CDHR3-207ENST00000470188 CAVIN2O95810 425 aa23.39■■□□□ 1.33
CDHR3-207ENST00000470188 FAM160A1Q05DH4 1040 aa23.39■■□□□ 1.33
CDHR3-207ENST00000470188 SNW1Q13573 536 aaKnown RBP23.39■■□□□ 1.33
CDHR3-207ENST00000470188 FSIP1Q8NA03 581 aa23.39■■□□□ 1.33
CDHR3-207ENST00000470188 NKX2-3Q8TAU0 364 aa23.39■■□□□ 1.33
CDHR3-207ENST00000470188 KINO60870 393 aaKnown RBP23.38■■□□□ 1.33
CDHR3-207ENST00000470188 MBD4O95243 580 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 SPC24Q8NBT2 197 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 RREB1Q92766 1687 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 RTL9Q8NET4 1388 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 PATL2C9JE40 543 aaKnown RBP23.38■■□□□ 1.33
CDHR3-207ENST00000470188 METAP2P50579 478 aaKnown RBP eCLIP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms