RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TGFB1P01137 390 aa10.23□□□□□ -0.77
COL11A1-208ENST00000470170 DRD2P14416 443 aa10.23□□□□□ -0.77
COL11A1-208ENST00000470170 ITPKAP23677 461 aa10.23□□□□□ -0.77
COL11A1-208ENST00000470170 MAOBP27338 520 aa10.23□□□□□ -0.77
COL11A1-208ENST00000470170 RNF43Q68DV7 783 aa10.23□□□□□ -0.77
COL11A1-208ENST00000470170 NBPF11Q86T75 865 aa10.23□□□□□ -0.77
COL11A1-208ENST00000470170 ECEL1O95672 775 aa10.22□□□□□ -0.77
COL11A1-208ENST00000470170 B3GALT4O96024 378 aa10.22□□□□□ -0.77
COL11A1-208ENST00000470170 MAP4P27816 1152 aaKnown RBP10.22□□□□□ -0.77
COL11A1-208ENST00000470170 SSTR4P31391 388 aa10.22□□□□□ -0.77
COL11A1-208ENST00000470170 TRIM56Q9BRZ2 755 aaKnown RBP10.22□□□□□ -0.77
COL11A1-208ENST00000470170 CYP11A1P05108 521 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 MAPK1P28482 360 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 GRM2Q14416 872 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 POU4F3Q15319 338 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 PRPF40BQ6NWY9 871 aaKnown RBP10.21□□□□□ -0.77
COL11A1-208ENST00000470170 PI16Q6UXB8 463 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 ZDHHC13Q8IUH4 622 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 GLIS3Q8NEA6 775 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 DBNDD2Q9BQY9 259 aa10.21□□□□□ -0.77
COL11A1-208ENST00000470170 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
COL11A1-208ENST00000470170 RXRBP28702 533 aa10.2□□□□□ -0.78
COL11A1-208ENST00000470170 IVNS1ABPQ9Y6Y0 642 aa10.2□□□□□ -0.78
COL11A1-208ENST00000470170 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
COL11A1-208ENST00000470170 C2CD4AQ8NCU7 369 aaPredicted RBP10.19□□□□□ -0.78
COL11A1-208ENST00000470170 PCMTD2Q9NV79 361 aa10.19□□□□□ -0.78
COL11A1-208ENST00000470170 CD97P48960 835 aa10.18□□□□□ -0.78
COL11A1-208ENST00000470170 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
COL11A1-208ENST00000470170 SOX4Q06945 474 aaPredicted RBP10.18□□□□□ -0.78
COL11A1-208ENST00000470170 CDPF1Q6NVV7 123 aa10.18□□□□□ -0.78
COL11A1-208ENST00000470170 SHKBP1Q8TBC3 707 aa10.18□□□□□ -0.78
COL11A1-208ENST00000470170 CORO1BQ9BR76 489 aa10.18□□□□□ -0.78
COL11A1-208ENST00000470170 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
COL11A1-208ENST00000470170 MED26O95402 600 aa10.17□□□□□ -0.78
COL11A1-208ENST00000470170 ADH5P11766 374 aa10.17□□□□□ -0.78
COL11A1-208ENST00000470170 ZNF157P51786 506 aaPredicted RBP10.17□□□□□ -0.78
COL11A1-208ENST00000470170 FAAP100Q0VG06 881 aa10.17□□□□□ -0.78
COL11A1-208ENST00000470170 DSC3Q14574 896 aa10.17□□□□□ -0.78
COL11A1-208ENST00000470170 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
COL11A1-208ENST00000470170 FBLIM1Q8WUP2 373 aa10.17□□□□□ -0.78
COL11A1-208ENST00000470170 MFSD14AQ96MC6 490 aa10.17□□□□□ -0.78
COL11A1-208ENST00000470170 PNMA6FA0A0J9YX94 578 aa10.16□□□□□ -0.78
COL11A1-208ENST00000470170 PRR19A6NJB7 356 aa10.16□□□□□ -0.78
COL11A1-208ENST00000470170 TREHO43280 583 aa10.16□□□□□ -0.78
COL11A1-208ENST00000470170 USP11P51784 963 aa10.16□□□□□ -0.78
COL11A1-208ENST00000470170 NLRP2Q9NX02 1062 aa10.16□□□□□ -0.78
COL11A1-208ENST00000470170 COBLO75128 1261 aa10.15□□□□□ -0.78
COL11A1-208ENST00000470170 FCGRTP55899 365 aa10.15□□□□□ -0.78
COL11A1-208ENST00000470170 AKAP4Q5JQC9 854 aa10.15□□□□□ -0.78
COL11A1-208ENST00000470170 ACTL7BQ9Y614 415 aa10.15□□□□□ -0.78
COL11A1-208ENST00000470170 FAM95CA0A1B0GW59 222 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 PLCB3Q01970 1234 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 NFKBIBQ15653 356 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 RPS26P11Q5JNZ5 115 aaPredicted RBP10.14□□□□□ -0.79
COL11A1-208ENST00000470170 HP1BP3Q5SSJ5 553 aaPredicted RBP10.14□□□□□ -0.79
COL11A1-208ENST00000470170 DTHD1Q6ZMT9 781 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 BCO2Q9BYV7 579 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 RAD18Q9NS91 495 aa10.14□□□□□ -0.79
COL11A1-208ENST00000470170 KCNA1Q09470 495 aa10.13□□□□□ -0.79
COL11A1-208ENST00000470170 PDE3AQ14432 1141 aa10.13□□□□□ -0.79
COL11A1-208ENST00000470170 ENOX2Q16206 610 aaKnown RBP10.13□□□□□ -0.79
COL11A1-208ENST00000470170 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
COL11A1-208ENST00000470170 ZFYVE1Q9HBF4 777 aa10.13□□□□□ -0.79
COL11A1-208ENST00000470170 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
COL11A1-208ENST00000470170 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
COL11A1-208ENST00000470170 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL11A1-208ENST00000470170 DYMQ7RTS9 669 aa10.12□□□□□ -0.79
COL11A1-208ENST00000470170 SHISA5Q8N114 240 aa10.12□□□□□ -0.79
COL11A1-208ENST00000470170 KIAA1324LA8MWY0 1029 aaPredicted RBP10.11□□□□□ -0.79
COL11A1-208ENST00000470170 RAB6AP20340 208 aa10.11□□□□□ -0.79
COL11A1-208ENST00000470170 PAOXQ6QHF9 649 aa10.11□□□□□ -0.79
COL11A1-208ENST00000470170 WDR18Q9BV38 432 aa10.11□□□□□ -0.79
COL11A1-208ENST00000470170 ZC3H12CQ9C0D7 883 aaKnown RBP10.11□□□□□ -0.79
COL11A1-208ENST00000470170 FAM105AQ9NUU6 356 aa10.11□□□□□ -0.79
COL11A1-208ENST00000470170 GPN3Q9UHW5 284 aaPredicted RBP10.11□□□□□ -0.79
COL11A1-208ENST00000470170 AOC2O75106 756 aa10.1□□□□□ -0.79
COL11A1-208ENST00000470170 F13BP05160 661 aa10.1□□□□□ -0.79
COL11A1-208ENST00000470170 GRIK1P39086 918 aa10.1□□□□□ -0.79
COL11A1-208ENST00000470170 MAPK8P45983 427 aa10.1□□□□□ -0.79
COL11A1-208ENST00000470170 NXPE4Q6UWF7 544 aa10.1□□□□□ -0.79
COL11A1-208ENST00000470170 EZH1Q92800 747 aaPredicted RBP10.1□□□□□ -0.79
COL11A1-208ENST00000470170 YIPF2Q9BWQ6 316 aa10.1□□□□□ -0.79
COL11A1-208ENST00000470170 WDR89Q96FK6 387 aaPredicted RBP10.09□□□□□ -0.79
COL11A1-208ENST00000470170 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
COL11A1-208ENST00000470170 CCDC86Q9H6F5 360 aaKnown RBP10.09□□□□□ -0.79
COL11A1-208ENST00000470170 PPP4R2Q9NY27 417 aa10.09□□□□□ -0.79
COL11A1-208ENST00000470170 NFICP08651 508 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 LIG1P18858 919 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 ADMP35318 185 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 INTS5Q6P9B9 1019 aaKnown RBP10.08□□□□□ -0.8
COL11A1-208ENST00000470170 ZSCAN29Q8IWY8 852 aaPredicted RBP10.08□□□□□ -0.8
COL11A1-208ENST00000470170 TRAIPQ9BWF2 469 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 ATG3Q9NT62 314 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 PRKAG2Q9UGJ0 569 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 PPP1R9AQ9ULJ8 1098 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 AKAP2Q9Y2D5 859 aa10.08□□□□□ -0.8
COL11A1-208ENST00000470170 SPINK2P20155 84 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 HOXA10P31260 410 aaPredicted RBP10.07□□□□□ -0.8
COL11A1-208ENST00000470170 ASPAP45381 313 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms