RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 MAPTP10636 758 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 TCF3P15923 654 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 TATP17735 454 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 RFX1P22670 979 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 TXLNAP40222 546 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 MAGEA9P43362 315 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 GSCP56915 257 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 PCBP4P57723 403 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 SRPK2P78362 688 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 LBRQ14739 615 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 NBPF9Q3BBW0 867 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 CFAP70Q5T0N1 1121 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 CASC1Q6TDU7 716 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 NBPF11Q86T75 865 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 WDR63Q8IWG1 891 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 C8orf37Q96NL8 207 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 SRRTQ9BXP5 876 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 KCND1Q9NSA2 647 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 MKRN1Q9UHC7 482 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 JRKLQ9Y4A0 524 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 PCDHGA11Q9Y5H2 935 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 ATP6V1DQ9Y5K8 247 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 EIF2AK4Q9P2K8 1649 aaKnown RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 PTPRGP23470 1445 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 NUP160Q12769 1436 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 TTC36A6NLP5 189 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 CCP110O43303 1012 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 EPB41L2O43491 1005 aaKnown RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 ATP2B1P20020 1258 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 TDO2P48775 406 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 HNRNPH2P55795 449 aaKnown RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 TMF1P82094 1093 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 MAP2K1Q02750 393 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 MVPQ14764 893 aaKnown RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 TTC31Q49AM3 519 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 CCDC183Q5T5S1 534 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 FIGNL1Q6PIW4 674 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 SLCO4C1Q6ZQN7 724 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 FILIP1Q7Z7B0 1213 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 ANKRD13AQ8IZ07 590 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 MSL3Q8N5Y2 521 aaKnown RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 EXOC4Q96A65 974 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 GCC1Q96CN9 775 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 INTS4Q96HW7 963 aaKnown RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 FAM210AQ96ND0 272 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 ZNF358Q9NW07 568 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 IQSEC3Q9UPP2 1182 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 GNEQ9Y223 722 aaKnown RBP5.72□□□□□ -1.49
SF3B1-207ENST00000468925 NOD1Q9Y239 953 aa5.72□□□□□ -1.49
SF3B1-207ENST00000468925 GRIN2BQ13224 1484 aa5.71□□□□□ -1.49
SF3B1-207ENST00000468925 DNMT1P26358 1616 aaKnown RBP5.71□□□□□ -1.5
SF3B1-207ENST00000468925 SYCE3A1L190 88 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 USP17L5A8MUK1 530 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 TMCO5BA8MYB1 307 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 MYO1CO00159 1063 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 NRDCO43847 1150 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 RPS6KA5O75582 802 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 ADCY5O95622 1261 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 CPP00450 1065 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 EPXP11678 715 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 SSFA2P28290 1259 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 SOX11P35716 441 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 FOXD4L6Q3SYB3 417 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-207ENST00000468925 SH3PXD2AQ5TCZ1 1133 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 JAKMIP3Q5VZ66 844 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 FOXD4L3Q6VB84 417 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-207ENST00000468925 LEKR1Q6ZMV7 388 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 SKAP1Q86WV1 359 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 TNS4Q8IZW8 715 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 TMEM87AQ8NBN3 555 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 FBXO18Q8NFZ0 1043 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 ZDHHC1Q8WTX9 485 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 TBC1D22AQ8WUA7 517 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 STAG1Q8WVM7 1258 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 BTBD6Q96KE9 485 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 ZIC5Q96T25 663 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 VRTNQ9H8Y1 702 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 STRN4Q9NRL3 753 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 TERF2IPQ9NYB0 399 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 PRR12Q9ULL5 1215 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 ZNF232Q9UNY5 417 aa5.71□□□□□ -1.5
SF3B1-207ENST00000468925 ST20-MTHFSA0A0A6YYL1 179 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 LOC102724159A0A0B4J2E5 919 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 TMEM88BA6NKF7 163 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 IPO8O15397 1037 aaKnown RBP5.7□□□□□ -1.5
SF3B1-207ENST00000468925 SGSM2O43147 1006 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 PRPF40AO75400 957 aaKnown RBP5.7□□□□□ -1.5
SF3B1-207ENST00000468925 CDC25BP30305 580 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 NUCB1Q02818 461 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 TNP2Q05952 138 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 PWP2Q15269 919 aaKnown RBP5.7□□□□□ -1.5
SF3B1-207ENST00000468925 ZKSCAN2Q63HK3 967 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 MCTP2Q6DN12 878 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 DNAJC14Q6Y2X3 702 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-207ENST00000468925 LRRC69Q6ZNQ3 347 aa5.7□□□□□ -1.5
SF3B1-207ENST00000468925 SRLQ86TD4 932 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms