RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PATL2C9JE40 543 aaKnown RBP22.55■■□□□ 1.2
SMC4-209ENST00000468653 HMGB1P09429 215 aaKnown RBP22.55■■□□□ 1.2
SMC4-209ENST00000468653 CHRNA5P30532 468 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 DPP8Q6V1X1 898 aaPredicted RBP22.55■■□□□ 1.2
SMC4-209ENST00000468653 STOX1Q6ZVD7 989 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 MAGEB6P1A0A0J9YX57 407 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 E7EWF7 191 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 ZNF213O14771 459 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 HAND2P61296 217 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 CUL4AQ13619 759 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 ANKRD1Q15327 319 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 OLFM4Q6UX06 510 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 LCORLQ8N3X6 602 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 CNKSR1Q969H4 720 aa22.55■■□□□ 1.2
SMC4-209ENST00000468653 LARP6Q9BRS8 491 aaKnown RBP22.55■■□□□ 1.2
SMC4-209ENST00000468653 CWC22Q9HCG8 908 aaKnown RBP22.55■■□□□ 1.2
SMC4-209ENST00000468653 IL1R1P14778 569 aa22.54■■□□□ 1.2
SMC4-209ENST00000468653 PRDX5P30044 214 aa22.54■■□□□ 1.2
SMC4-209ENST00000468653 MECOMQ03112 1051 aa22.54■■□□□ 1.2
SMC4-209ENST00000468653 ADGRA1Q86SQ6 560 aa22.54■■□□□ 1.2
SMC4-209ENST00000468653 NSUN4Q96CB9 384 aaKnown RBP22.54■■□□□ 1.2
SMC4-209ENST00000468653 TCEANC2Q96MN5 208 aa22.54■■□□□ 1.2
SMC4-209ENST00000468653 SALL1Q9NSC2 1324 aa22.54■■□□□ 1.2
SMC4-209ENST00000468653 COL9A3Q14050 684 aaPredicted RBP22.53■■□□□ 1.2
SMC4-209ENST00000468653 ALX1Q15699 326 aa22.53■■□□□ 1.2
SMC4-209ENST00000468653 TMED8Q6PL24 325 aaPredicted RBP22.53■■□□□ 1.2
SMC4-209ENST00000468653 ZSCAN31Q96LW9 406 aaPredicted RBP22.53■■□□□ 1.2
SMC4-209ENST00000468653 ALDH8A1Q9H2A2 487 aaPredicted RBP22.53■■□□□ 1.2
SMC4-209ENST00000468653 SLC4A4Q9Y6R1 1079 aa22.53■■□□□ 1.2
SMC4-209ENST00000468653 RIMBP2O15034 1052 aa22.53■■□□□ 1.2
SMC4-209ENST00000468653 DZIP1Q86YF9 867 aaKnown RBP22.53■■□□□ 1.2
SMC4-209ENST00000468653 IFNL3Q8IZI9 196 aa22.53■■□□□ 1.2
SMC4-209ENST00000468653 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
SMC4-209ENST00000468653 ZC3H12CQ9C0D7 883 aaKnown RBP22.53■■□□□ 1.2
SMC4-209ENST00000468653 NAPBQ9H115 298 aa22.53■■□□□ 1.2
SMC4-209ENST00000468653 LTBP1Q14766 1721 aa22.52■■□□□ 1.2
SMC4-209ENST00000468653 LDHBP07195 334 aaKnown RBP22.52■■□□□ 1.2
SMC4-209ENST00000468653 DHX32Q7L7V1 743 aaKnown RBP22.52■■□□□ 1.2
SMC4-209ENST00000468653 ZNF384Q8TF68 577 aa22.52■■□□□ 1.2
SMC4-209ENST00000468653 INTS4Q96HW7 963 aaKnown RBP22.52■■□□□ 1.2
SMC4-209ENST00000468653 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
SMC4-209ENST00000468653 GSG1L2A8MUP6 293 aa22.51■■□□□ 1.19
SMC4-209ENST00000468653 PRKAB2O43741 272 aa22.51■■□□□ 1.19
SMC4-209ENST00000468653 IGSF3O75054 1194 aa22.51■■□□□ 1.19
SMC4-209ENST00000468653 ZMYM6O95789 1325 aa22.51■■□□□ 1.19
SMC4-209ENST00000468653 NBR1Q14596 966 aa22.5■■□□□ 1.19
SMC4-209ENST00000468653 COA1Q9GZY4 146 aa22.5■■□□□ 1.19
SMC4-209ENST00000468653 SH2B1Q9NRF2 756 aaPredicted RBP22.5■■□□□ 1.19
SMC4-209ENST00000468653 TDO2P48775 406 aa22.5■■□□□ 1.19
SMC4-209ENST00000468653 FGD1P98174 961 aa22.5■■□□□ 1.19
SMC4-209ENST00000468653 EYA3Q99504 573 aa22.5■■□□□ 1.19
SMC4-209ENST00000468653 RIOK1Q9BRS2 568 aaKnown RBP22.5■■□□□ 1.19
SMC4-209ENST00000468653 EPB41L4AQ9HCS5 686 aaPredicted RBP22.5■■□□□ 1.19
SMC4-209ENST00000468653 C10orf71Q711Q0 1435 aa22.49■■□□□ 1.19
SMC4-209ENST00000468653 TOB2Q14106 344 aaPredicted RBP22.49■■□□□ 1.19
SMC4-209ENST00000468653 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
SMC4-209ENST00000468653 ZNF219Q9P2Y4 722 aaPredicted RBP22.49■■□□□ 1.19
SMC4-209ENST00000468653 G3V3G9 751 aa22.48■■□□□ 1.19
SMC4-209ENST00000468653 DYNLL1P63167 89 aaKnown RBP22.48■■□□□ 1.19
SMC4-209ENST00000468653 GSTO1P78417 241 aa22.48■■□□□ 1.19
SMC4-209ENST00000468653 DCAF8Q5TAQ9 597 aa22.48■■□□□ 1.19
SMC4-209ENST00000468653 Q6ZUG5 572 aa22.48■■□□□ 1.19
SMC4-209ENST00000468653 RALYLQ86SE5 291 aaKnown RBP22.48■■□□□ 1.19
SMC4-209ENST00000468653 NCOA7Q8NI08 942 aa22.48■■□□□ 1.19
SMC4-209ENST00000468653 TPCN1Q9ULQ1 816 aa22.48■■□□□ 1.19
SMC4-209ENST00000468653 ZBTB7AO95365 584 aa22.47■■□□□ 1.19
SMC4-209ENST00000468653 LARGE1O95461 756 aa22.47■■□□□ 1.19
SMC4-209ENST00000468653 EXOSC10Q01780 885 aaKnown RBP22.47■■□□□ 1.19
SMC4-209ENST00000468653 TRDNQ13061 729 aa22.47■■□□□ 1.19
SMC4-209ENST00000468653 NFKBIBQ15653 356 aa22.47■■□□□ 1.19
SMC4-209ENST00000468653 TBC1D22AQ8WUA7 517 aa22.47■■□□□ 1.19
SMC4-209ENST00000468653 DUOX1Q9NRD9 1551 aa22.47■■□□□ 1.19
SMC4-209ENST00000468653 SLX4Q8IY92 1834 aa22.46■■□□□ 1.19
SMC4-209ENST00000468653 ME3Q16798 604 aa22.46■■□□□ 1.19
SMC4-209ENST00000468653 SDR42E1Q8WUS8 393 aa22.46■■□□□ 1.19
SMC4-209ENST00000468653 LRRC2Q9BYS8 371 aa22.46■■□□□ 1.19
SMC4-209ENST00000468653 AATFQ9NY61 560 aaKnown RBP eCLIP22.46■■□□□ 1.194e-8■■■■■ 116
SMC4-209ENST00000468653 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.46■■□□□ 1.19
SMC4-209ENST00000468653 CCDC88AQ3V6T2 1871 aa22.46■■□□□ 1.19
SMC4-209ENST00000468653 MAST2Q6P0Q8 1798 aa22.46■■□□□ 1.19
SMC4-209ENST00000468653 MFSD14BQ5SR56 506 aa22.45■■□□□ 1.19
SMC4-209ENST00000468653 TBC1D10CQ8IV04 446 aa22.45■■□□□ 1.19
SMC4-209ENST00000468653 NBPF3Q9H094 633 aa22.45■■□□□ 1.19
SMC4-209ENST00000468653 FAM205AQ6ZU69 1335 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 LDHCP07864 332 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 GTF2IP78347 998 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 NUCB2P80303 420 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 GRIK5Q16478 980 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 DOK7Q18PE1 504 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 CC2D2BQ6DHV5 1058 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 CCDC83Q8IWF9 413 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 CRNKL1Q9BZJ0 848 aaKnown RBP22.45■■□□□ 1.18
SMC4-209ENST00000468653 LAMA4Q16363 1823 aa22.45■■□□□ 1.18
SMC4-209ENST00000468653 MCM5P33992 734 aa22.44■■□□□ 1.18
SMC4-209ENST00000468653 RAB3GAP1Q15042 981 aa22.44■■□□□ 1.18
SMC4-209ENST00000468653 C7orf43Q8WVR3 580 aa22.44■■□□□ 1.18
SMC4-209ENST00000468653 BRF1Q92994 677 aa22.44■■□□□ 1.18
SMC4-209ENST00000468653 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
SMC4-209ENST00000468653 POLD1P28340 1107 aa22.43■■□□□ 1.18
SMC4-209ENST00000468653 CHST3Q7LGC8 479 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms