RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ORC1Q13415 861 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 HP1BP3Q5SSJ5 553 aaPredicted RBP10.19□□□□□ -0.78
SMC4-205ENST00000465563 PAOXQ6QHF9 649 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 DTX1Q86Y01 620 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 DDX54Q8TDD1 881 aaKnown RBP10.19□□□□□ -0.78
SMC4-205ENST00000465563 KRTAP9-2Q9BYQ4 174 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 ZFYVE1Q9HBF4 777 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 ATG3Q9NT62 314 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 GP2P55259 537 aaKnown RBP10.18□□□□□ -0.78
SMC4-205ENST00000465563 POU4F3Q15319 338 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 NFKBIBQ15653 356 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 MCTP1Q6DN14 999 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 FBXL6Q8N531 539 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 C2CD4AQ8NCU7 369 aaPredicted RBP10.18□□□□□ -0.78
SMC4-205ENST00000465563 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 FBLIM1Q8WUP2 373 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 YIPF2Q9BWQ6 316 aa10.18□□□□□ -0.78
SMC4-205ENST00000465563 CDPF1Q6NVV7 123 aa10.17□□□□□ -0.78
SMC4-205ENST00000465563 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
SMC4-205ENST00000465563 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
SMC4-205ENST00000465563 NPHS2Q9NP85 383 aa10.17□□□□□ -0.78
SMC4-205ENST00000465563 PIM2Q9P1W9 311 aa10.17□□□□□ -0.78
SMC4-205ENST00000465563 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.16□□□□□ -0.78
SMC4-205ENST00000465563 B3GALT4O96024 378 aa10.16□□□□□ -0.78
SMC4-205ENST00000465563 ADH5P11766 374 aa10.16□□□□□ -0.78
SMC4-205ENST00000465563 DNAJC25Q9H1X3 360 aa10.16□□□□□ -0.78
SMC4-205ENST00000465563 ZNF576Q9H609 170 aa10.16□□□□□ -0.78
SMC4-205ENST00000465563 LEMD3Q9Y2U8 911 aa10.16□□□□□ -0.78
SMC4-205ENST00000465563 OAS3Q9Y6K5 1087 aaKnown RBP10.16□□□□□ -0.78
SMC4-205ENST00000465563 F13BP05160 661 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 ITPKAP23677 461 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 IRAK1P51617 712 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 CCER1Q8TC90 406 aaPredicted RBP10.15□□□□□ -0.78
SMC4-205ENST00000465563 CORO1BQ9BR76 489 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 OSBPL1AQ9BXW6 950 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 NIF3L1Q9GZT8 377 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 RAD18Q9NS91 495 aa10.15□□□□□ -0.78
SMC4-205ENST00000465563 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
SMC4-205ENST00000465563 EIF1AYO14602 144 aaKnown RBP10.14□□□□□ -0.79
SMC4-205ENST00000465563 ADAMTS4O75173 837 aa10.14□□□□□ -0.79
SMC4-205ENST00000465563 WNT11O96014 354 aa10.14□□□□□ -0.79
SMC4-205ENST00000465563 CTSBP07858 339 aa10.14□□□□□ -0.79
SMC4-205ENST00000465563 CPSF6Q16630 551 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMC4-205ENST00000465563 EZH1Q92800 747 aaPredicted RBP10.14□□□□□ -0.79
SMC4-205ENST00000465563 CCDC74AQ96AQ1 378 aa10.14□□□□□ -0.79
SMC4-205ENST00000465563 TRIM56Q9BRZ2 755 aaKnown RBP10.14□□□□□ -0.79
SMC4-205ENST00000465563 GPR182O15218 404 aa10.13□□□□□ -0.79
SMC4-205ENST00000465563 HOXA10P31260 410 aaPredicted RBP10.13□□□□□ -0.79
SMC4-205ENST00000465563 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
SMC4-205ENST00000465563 KRTAP9-6A0A140TA67 174 aa10.12□□□□□ -0.79
SMC4-205ENST00000465563 SUPT5HO00267 1087 aaKnown RBP10.12□□□□□ -0.79
SMC4-205ENST00000465563 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
SMC4-205ENST00000465563 AKAP4Q5JQC9 854 aa10.12□□□□□ -0.79
SMC4-205ENST00000465563 DMRTB1Q96MA1 342 aa10.12□□□□□ -0.79
SMC4-205ENST00000465563 METTL22Q9BUU2 404 aaPredicted RBP10.12□□□□□ -0.79
SMC4-205ENST00000465563 ACTL7BQ9Y614 415 aa10.12□□□□□ -0.79
SMC4-205ENST00000465563 IGHA2P01877 340 aa10.11□□□□□ -0.79
SMC4-205ENST00000465563 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
SMC4-205ENST00000465563 DYMQ7RTS9 669 aa10.11□□□□□ -0.79
SMC4-205ENST00000465563 TBC1D32Q96NH3 1257 aa10.11□□□□□ -0.79
SMC4-205ENST00000465563 ABCB6Q9NP58 842 aa10.11□□□□□ -0.79
SMC4-205ENST00000465563 PRKAG2Q9UGJ0 569 aa10.11□□□□□ -0.79
SMC4-205ENST00000465563 TRAK1Q9UPV9 953 aa10.11□□□□□ -0.79
SMC4-205ENST00000465563 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 ECEL1O95672 775 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 FOSL1P15407 271 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 AP3B2Q13367 1082 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 MAP7Q14244 749 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 RPS26P11Q5JNZ5 115 aaPredicted RBP10.1□□□□□ -0.79
SMC4-205ENST00000465563 ZAR1Q86SH2 424 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 RBCK1Q9BYM8 510 aa10.1□□□□□ -0.79
SMC4-205ENST00000465563 RAB6AP20340 208 aa10.09□□□□□ -0.79
SMC4-205ENST00000465563 ADMP35318 185 aa10.09□□□□□ -0.79
SMC4-205ENST00000465563 SHISA5Q8N114 240 aa10.09□□□□□ -0.79
SMC4-205ENST00000465563 ALKBH8Q96BT7 664 aaKnown RBP10.09□□□□□ -0.79
SMC4-205ENST00000465563 AP4E1Q9UPM8 1137 aa10.09□□□□□ -0.79
SMC4-205ENST00000465563 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.08□□□□□ -0.8
SMC4-205ENST00000465563 PAX4O43316 350 aa10.08□□□□□ -0.8
SMC4-205ENST00000465563 NFICP08651 508 aa10.08□□□□□ -0.8
SMC4-205ENST00000465563 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
SMC4-205ENST00000465563 SOWAHDA6NJG2 315 aa10.07□□□□□ -0.8
SMC4-205ENST00000465563 AOC2O75106 756 aa10.07□□□□□ -0.8
SMC4-205ENST00000465563 ASPAP45381 313 aa10.07□□□□□ -0.8
SMC4-205ENST00000465563 SEMA6CQ9H3T2 930 aa10.07□□□□□ -0.8
SMC4-205ENST00000465563 FAM105AQ9NUU6 356 aa10.07□□□□□ -0.8
SMC4-205ENST00000465563 CYP26A1O43174 497 aa10.06□□□□□ -0.8
SMC4-205ENST00000465563 TAL1P17542 331 aaPredicted RBP10.06□□□□□ -0.8
SMC4-205ENST00000465563 GRM2Q14416 872 aa10.06□□□□□ -0.8
SMC4-205ENST00000465563 MSMPQ1L6U9 139 aa10.06□□□□□ -0.8
SMC4-205ENST00000465563 EPS8L3Q8TE67 593 aaKnown RBP10.06□□□□□ -0.8
SMC4-205ENST00000465563 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
SMC4-205ENST00000465563 ACSS3Q9H6R3 686 aa10.06□□□□□ -0.8
SMC4-205ENST00000465563 ANGEL1Q9UNK9 670 aaKnown RBP10.06□□□□□ -0.8
SMC4-205ENST00000465563 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
SMC4-205ENST00000465563 DUSP27Q5VZP5 1158 aa10.05□□□□□ -0.8
SMC4-205ENST00000465563 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
SMC4-205ENST00000465563 GATA6Q92908 595 aa10.05□□□□□ -0.8
SMC4-205ENST00000465563 WDR18Q9BV38 432 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms