RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
APP-213ENST00000464867 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■■□ 19.9
APP-213ENST00000464867 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
APP-213ENST00000464867 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
APP-213ENST00000464867 LDLRAD1Q5T700 205 aa12.41□□□□□ -0.42
APP-213ENST00000464867 NKX2-3Q8TAU0 364 aa12.41□□□□□ -0.42
APP-213ENST00000464867 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
APP-213ENST00000464867 PTCH2Q9Y6C5 1203 aa12.41□□□□□ -0.42
APP-213ENST00000464867 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
APP-213ENST00000464867 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
APP-213ENST00000464867 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
APP-213ENST00000464867 PPP1R12BO60237 982 aaPredicted RBP12.4□□□□□ -0.42
APP-213ENST00000464867 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
APP-213ENST00000464867 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
APP-213ENST00000464867 PRO3102Q9H379 93 aa12.4□□□□□ -0.42
APP-213ENST00000464867 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
APP-213ENST00000464867 STXBP5LQ9Y2K9 1186 aa12.4□□□□□ -0.42
APP-213ENST00000464867 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
APP-213ENST00000464867 DCTN1Q14203 1278 aa12.39□□□□□ -0.43
APP-213ENST00000464867 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
APP-213ENST00000464867 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
APP-213ENST00000464867 DEFB123Q8N688 67 aa12.39□□□□□ -0.43
APP-213ENST00000464867 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
APP-213ENST00000464867 WNK4Q96J92 1243 aa12.39□□□□□ -0.43
APP-213ENST00000464867 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
APP-213ENST00000464867 PSME4Q14997 1843 aa12.39□□□□□ -0.43
APP-213ENST00000464867 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
APP-213ENST00000464867 SOX1O00570 391 aaPredicted RBP12.38□□□□□ -0.43
APP-213ENST00000464867 UFL1O94874 794 aa12.38□□□□□ -0.43
APP-213ENST00000464867 KIF22Q14807 665 aa12.38□□□□□ -0.43
APP-213ENST00000464867 SH3TC2Q8TF17 1288 aa12.38□□□□□ -0.43
APP-213ENST00000464867 TATDN2Q93075 761 aa12.38□□□□□ -0.43
APP-213ENST00000464867 GMLQ99445 158 aa12.38□□□□□ -0.43
APP-213ENST00000464867 GGA1Q9UJY5 639 aa12.38□□□□□ -0.43
APP-213ENST00000464867 UNCXA6NJT0 531 aa12.37□□□□□ -0.43
APP-213ENST00000464867 WNT10BO00744 389 aa12.37□□□□□ -0.43
APP-213ENST00000464867 MMP14P50281 582 aa12.37□□□□□ -0.43
APP-213ENST00000464867 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
APP-213ENST00000464867 EIF4G2P78344 907 aaKnown RBP eCLIP12.37□□□□□ -0.43
APP-213ENST00000464867 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
APP-213ENST00000464867 PODNQ7Z5L7 613 aa12.37□□□□□ -0.43
APP-213ENST00000464867 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
APP-213ENST00000464867 ZFYVE28Q9HCC9 887 aa12.37□□□□□ -0.43
APP-213ENST00000464867 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
APP-213ENST00000464867 LAMB1P07942 1786 aa12.36□□□□□ -0.43
APP-213ENST00000464867 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
APP-213ENST00000464867 EIF4A1P60842 406 aaKnown RBP12.36□□□□□ -0.43
APP-213ENST00000464867 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
APP-213ENST00000464867 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
APP-213ENST00000464867 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
APP-213ENST00000464867 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
APP-213ENST00000464867 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
APP-213ENST00000464867 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
APP-213ENST00000464867 LAMA3Q16787 3333 aa12.35□□□□□ -0.43
APP-213ENST00000464867 GNRH1P01148 92 aa12.35□□□□□ -0.43
APP-213ENST00000464867 PRMT2P55345 433 aa12.35□□□□□ -0.43
APP-213ENST00000464867 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
APP-213ENST00000464867 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
APP-213ENST00000464867 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
APP-213ENST00000464867 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
APP-213ENST00000464867 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
APP-213ENST00000464867 SASH1O94885 1247 aa12.34□□□□□ -0.43
APP-213ENST00000464867 NEFMP07197 916 aa12.34□□□□□ -0.43
APP-213ENST00000464867 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
APP-213ENST00000464867 TAF1CQ15572 869 aaPredicted RBP12.34□□□□□ -0.43
APP-213ENST00000464867 MAP3K11Q16584 847 aa12.34□□□□□ -0.43
APP-213ENST00000464867 SUPT20HL1Q3ZLR7 823 aa12.34□□□□□ -0.43
APP-213ENST00000464867 PADI6Q6TGC4 694 aa12.34□□□□□ -0.43
APP-213ENST00000464867 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
APP-213ENST00000464867 CLMNQ96JQ2 1002 aa12.34□□□□□ -0.43
APP-213ENST00000464867 TSR3Q9UJK0 312 aaKnown RBP12.34□□□□□ -0.43
APP-213ENST00000464867 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
APP-213ENST00000464867 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
APP-213ENST00000464867 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
APP-213ENST00000464867 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
APP-213ENST00000464867 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
APP-213ENST00000464867 CAP1Q01518 475 aa12.33□□□□□ -0.44
APP-213ENST00000464867 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
APP-213ENST00000464867 SHISA4Q96DD7 197 aa12.33□□□□□ -0.44
APP-213ENST00000464867 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
APP-213ENST00000464867 STAP2Q9UGK3 403 aa12.33□□□□□ -0.44
APP-213ENST00000464867 FZD1Q9UP38 647 aa12.33□□□□□ -0.44
APP-213ENST00000464867 HSP90B1P14625 803 aaKnown RBP12.32□□□□□ -0.44
APP-213ENST00000464867 GJA8P48165 433 aa12.32□□□□□ -0.44
APP-213ENST00000464867 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
APP-213ENST00000464867 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
APP-213ENST00000464867 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
APP-213ENST00000464867 PTPN18Q99952 460 aa12.32□□□□□ -0.44
APP-213ENST00000464867 SEMA3EO15041 775 aa12.31□□□□□ -0.44
APP-213ENST00000464867 FARP2O94887 1054 aaPredicted RBP12.31□□□□□ -0.44
APP-213ENST00000464867 GJB1P08034 283 aa12.31□□□□□ -0.44
APP-213ENST00000464867 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
APP-213ENST00000464867 MTFR1Q15390 333 aa12.31□□□□□ -0.44
APP-213ENST00000464867 Q7L0L9 218 aa12.31□□□□□ -0.44
APP-213ENST00000464867 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
APP-213ENST00000464867 BIN2Q9UBW5 565 aaPredicted RBP12.31□□□□□ -0.44
APP-213ENST00000464867 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
APP-213ENST00000464867 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
APP-213ENST00000464867 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
APP-213ENST00000464867 HOXD10P28358 340 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms