RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 LILRB3O75022 631 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 TPM1P09493 284 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PTGS1P23219 599 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PAX7P23759 505 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 SYCP1Q15431 976 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 DUSP27Q5VZP5 1158 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 RIC3Q7Z5B4 369 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 NLRP13Q86W25 1043 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 MICALL1Q8N3F8 863 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PPM1EQ8WY54 764 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 SNX21Q969T3 373 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 THOC1Q96FV9 657 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 EIF3CQ99613 913 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 MTRQ99707 1265 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PAIP2Q9BPZ3 127 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 NUCKS1Q9H1E3 243 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 KNSTRNQ9Y448 316 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PCDHB3Q9Y5E6 796 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 ROCK2O75116 1388 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 CCDC196A0A1B0GTZ2 297 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 SMC2O95347 1197 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 IPO7O95373 1038 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 TGFB2P61812 414 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PSMD2Q13200 908 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 HABP4Q5JVS0 413 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 DESI1Q6ICB0 168 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 CASC1Q6TDU7 716 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 LEKR1Q6ZMV7 388 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 MMS22LQ6ZRQ5 1243 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 NUTM1Q86Y26 1132 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 FBXO18Q8NFZ0 1043 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 GOLGA5Q8TBA6 731 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 PMFBP1Q8TBY8 1022 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 CCDC34Q96HJ3 373 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 CPSF2Q9P2I0 782 aaKnown RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 RPS6KL1Q9Y6S9 549 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 N4BP2Q86UW6 1770 aaPredicted RBP4.24□□□□□ -1.73
COL8A1-205ENST00000463753 ZPR1O75312 459 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PLA2G4AP47712 749 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 NUCB2P80303 420 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 LRMPQ12912 555 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 DHX8Q14562 1220 aaKnown RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 AP1ARQ63HQ0 302 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 CEP135Q66GS9 1140 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 BLOC1S3Q6QNY0 202 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 CCDC97Q96F63 343 aaPredicted RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PLEKHA4Q9H4M7 779 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PCDHGC3Q9UN70 934 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PCDHB15Q9Y5E8 787 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 CGNL1Q0VF96 1302 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 FRMD3A2A2Y4 597 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 MOXD2PA6NHM9 499 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 SPDYE5A6NIY4 337 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PNMA6AP0CW24 399 aaPredicted RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 OAS2P29728 719 aaKnown RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 MMP16P51512 607 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 INHBEP58166 350 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 SF3A1Q15459 793 aaKnown RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 FOXR1Q6PIV2 292 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 GDPD2Q9HCC8 539 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PICK1Q9NRD5 415 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PAXBP1Q9Y5B6 917 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 FHOD1Q9Y613 1164 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PASKQ96RG2 1323 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 ADH1BP00325 375 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 CLK2P49760 499 aaKnown RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 PTPN5P54829 565 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 TRDNQ13061 729 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 ERCC6LQ2NKX8 1250 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 SYAP1Q96A49 352 aaPredicted RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 JPH2Q9BR39 696 aaPredicted RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 FAM53CQ9NYF3 392 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 G3BP2Q9UN86 482 aaKnown RBP4.23□□□□□ -1.73
COL8A1-205ENST00000463753 SLC27A5Q9Y2P5 690 aa4.23□□□□□ -1.73
COL8A1-205ENST00000463753 COL5A2P05997 1499 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 PTPRCP08575 1304 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 DLL1O00548 723 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 AP1G2O75843 785 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 SEC31AO94979 1220 aaKnown RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 ECEL1O95672 775 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 MBD3O95983 291 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 RABEP1Q15276 862 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 ZRSR1Q15695 479 aaKnown RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 GORABQ5T7V8 394 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 GBP6Q6ZN66 633 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 SUGP1Q8IWZ8 645 aaKnown RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 SCUBE3Q8IX30 993 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 PUS7Q96PZ0 661 aaKnown RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 CEP89Q96ST8 783 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 KIF2CQ99661 725 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 BCL2L13Q9BXK5 485 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 SRRTQ9BXP5 876 aaKnown RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 RWDD1Q9H446 243 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 BSDC1Q9NW68 430 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 LIMD1Q9UGP4 676 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 FMNL1O95466 1100 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-205ENST00000463753 TSPY4P0CV99 314 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 TSPY10P0CW01 314 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 FDX1P10109 184 aa4.22□□□□□ -1.73
COL8A1-205ENST00000463753 C11orf91Q3C1V1 193 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms