RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 PRKAB2O43741 272 aa17.9■□□□□ 0.46
RPRD1B-203ENST00000462548 MECOMQ03112 1051 aa17.9■□□□□ 0.46
RPRD1B-203ENST00000462548 DPP8Q6V1X1 898 aaPredicted RBP17.9■□□□□ 0.46
RPRD1B-203ENST00000462548 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
RPRD1B-203ENST00000462548 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
RPRD1B-203ENST00000462548 CHD4Q14839 1912 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 DDIT3P35638 169 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 EPB41L4AQ9HCS5 686 aaPredicted RBP17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 SALL1Q9NSC2 1324 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 LAMA4Q16363 1823 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 HAND2P61296 217 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 DLEC1Q9Y238 1755 aa17.89■□□□□ 0.45
RPRD1B-203ENST00000462548 MAST2Q6P0Q8 1798 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 RIOK1Q9BRS2 568 aaKnown RBP17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 PSMA5P28066 241 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 MCM2P49736 904 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 DYNLL1P63167 89 aaKnown RBP17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 BLOC1S2Q6QNY1 142 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 WDR66Q8TBY9 1149 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 NEK1Q96PY6 1258 aa17.88■□□□□ 0.45
RPRD1B-203ENST00000462548 GSG1L2A8MUP6 293 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 E7EWF7 191 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 KRT32Q14532 448 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 NBPF3Q9H094 633 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 CTNNA3Q9UI47 895 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 KIF13BQ9NQT8 1826 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 PATL2C9JE40 543 aaKnown RBP17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 APPP05067 770 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 KCNA3P22001 575 aa17.87■□□□□ 0.45
RPRD1B-203ENST00000462548 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 MAGEB6P1A0A0J9YX57 407 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 DPEP1P16444 411 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 LARGE1O95461 756 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 DOK7Q18PE1 504 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 IFNL3Q8IZI9 196 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 SLC4A4Q9Y6R1 1079 aa17.86■□□□□ 0.45
RPRD1B-203ENST00000462548 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 ALX1Q15699 326 aa17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 IMMTQ16891 758 aaKnown RBP17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 ZC3H12CQ9C0D7 883 aaKnown RBP17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 KIAA1551Q9HCM1 1747 aa17.85■□□□□ 0.45
RPRD1B-203ENST00000462548 CUL4AQ13619 759 aa17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 SPTY2D1Q68D10 685 aaPredicted RBP17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 LDHBP07195 334 aaKnown RBP17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 TOB2Q14106 344 aaPredicted RBP17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 TBC1D10CQ8IV04 446 aa17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
RPRD1B-203ENST00000462548 PSDA5PKW4 1024 aaPredicted RBP17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 ZNF213O14771 459 aa17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 C21orf2O43822 256 aa17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 NKX2-3Q8TAU0 364 aa17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 FAM205AQ6ZU69 1335 aa17.83■□□□□ 0.45
RPRD1B-203ENST00000462548 ZMYM6O95789 1325 aa17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 GTF2IP78347 998 aa17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 DIXDC1Q155Q3 683 aa17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 RTFDC1Q9BY42 306 aaPredicted RBP17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 ALDH8A1Q9H2A2 487 aaPredicted RBP17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 TACC3Q9Y6A5 838 aa17.83■□□□□ 0.44
RPRD1B-203ENST00000462548 GNAT2P19087 354 aa17.82■□□□□ 0.44
RPRD1B-203ENST00000462548 TPCN1Q9ULQ1 816 aa17.82■□□□□ 0.44
RPRD1B-203ENST00000462548 EXOSC10Q01780 885 aaKnown RBP17.82■□□□□ 0.44
RPRD1B-203ENST00000462548 TTLL6Q8N841 843 aa17.82■□□□□ 0.44
RPRD1B-203ENST00000462548 NAPBQ9H115 298 aa17.82■□□□□ 0.44
RPRD1B-203ENST00000462548 ST3GAL1Q11201 340 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 MFSD14BQ5SR56 506 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 EYA3Q99504 573 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 DBNDD1Q9H9R9 158 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 CHMP5Q9NZZ3 219 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 Q6ZUG5 572 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 CHST3Q7LGC8 479 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 INCENPQ9NQS7 918 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 KCNQ5Q9NR82 932 aa17.81■□□□□ 0.44
RPRD1B-203ENST00000462548 SMIM22K7EJ46 135 aa17.8■□□□□ 0.44
RPRD1B-203ENST00000462548 POLD1P28340 1107 aa17.8■□□□□ 0.44
RPRD1B-203ENST00000462548 ME3Q16798 604 aa17.8■□□□□ 0.44
RPRD1B-203ENST00000462548 CERS5Q8N5B7 392 aa17.8■□□□□ 0.44
RPRD1B-203ENST00000462548 MYH2Q9UKX2 1941 aa17.8■□□□□ 0.44
RPRD1B-203ENST00000462548 TDO2P48775 406 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms