RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 HMG20BQ9P0W2 317 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 PDIA3P30101 505 aaKnown RBP8.64□□□□□ -1.03
NPHP1-209ENST00000461707 PHKA1P46020 1223 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 GIGYF2Q6Y7W6 1299 aaKnown RBP8.64□□□□□ -1.03
NPHP1-209ENST00000461707 DHX32Q7L7V1 743 aaKnown RBP8.64□□□□□ -1.03
NPHP1-209ENST00000461707 LUZP1Q86V48 1076 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 ENGASEQ8NFI3 743 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 PTPDC1A2A3K4 754 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 LDHAL6AQ6ZMR3 332 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 AIFM3Q96NN9 605 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 GOLPH3LQ9H4A5 285 aa8.64□□□□□ -1.03
NPHP1-209ENST00000461707 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
NPHP1-209ENST00000461707 TTC39AQ5SRH9 613 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 STK11IPQ8N1F8 1099 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 ZNF384Q8TF68 577 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 HELLSQ9NRZ9 838 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 MRVI1Q9Y6F6 885 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 IRS4O14654 1257 aaPredicted RBP8.63□□□□□ -1.03
NPHP1-209ENST00000461707 KCNQ2O43526 872 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 IFIT5Q13325 482 aaKnown RBP8.63□□□□□ -1.03
NPHP1-209ENST00000461707 ALX1Q15699 326 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 HSD3B7Q9H2F3 369 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 ZKSCAN5Q9Y2L8 839 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 PFKFB2O60825 505 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 METTL24Q5JXM2 366 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 SUSD4Q5VX71 490 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
NPHP1-209ENST00000461707 SPATA32Q96LK8 384 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 SPTLC3Q9NUV7 552 aa8.63□□□□□ -1.03
NPHP1-209ENST00000461707 DICER1Q9UPY3 1922 aaKnown RBP8.63□□□□□ -1.03
NPHP1-209ENST00000461707 ARID2Q68CP9 1835 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 IGSF3O75054 1194 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 FGD1P98174 961 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 SNW1Q13573 536 aaKnown RBP8.62□□□□□ -1.03
NPHP1-209ENST00000461707 GORABQ5T7V8 394 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 MB21D2Q8IYB1 491 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-209ENST00000461707 USP28Q96RU2 1077 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 TRMT112Q9UI30 125 aaKnown RBP8.62□□□□□ -1.03
NPHP1-209ENST00000461707 CTSWP56202 376 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 KRT85P78386 507 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 ITPK1Q13572 414 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 ANKRD1Q15327 319 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 KIF6Q6ZMV9 814 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 TBC1D10CQ8IV04 446 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 SPC24Q8NBT2 197 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 GPAA1O43292 621 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 ATP2B3Q16720 1220 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 SLC10A5Q5PT55 438 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 C3orf67Q6ZVT6 689 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 CYB5R4Q7L1T6 521 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
NPHP1-209ENST00000461707 TSC1Q92574 1164 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 KCNF1Q9H3M0 494 aa8.62□□□□□ -1.03
NPHP1-209ENST00000461707 MKRN1Q9UHC7 482 aaKnown RBP8.62□□□□□ -1.03
NPHP1-209ENST00000461707 CAMTA2O94983 1202 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 MSNP26038 577 aaKnown RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 GTF2F1P35269 517 aaKnown RBP eCLIP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 R3HCC1Q9Y3T6 440 aaKnown RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 UTRNP46939 3433 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 TMED8Q6PL24 325 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 DZIP3Q86Y13 1208 aaKnown RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 SYAP1Q96A49 352 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 MTA3Q9BTC8 594 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 MYL10Q9BUA6 226 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 NRBP1Q9UHY1 535 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 KLRG2A4D1S0 409 aaPredicted RBP8.61□□□□□ -1.03
NPHP1-209ENST00000461707 KIF28PB7ZC32 967 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 PRKAB2O43741 272 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 OFD1O75665 1012 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 STARD3NLO95772 234 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 EVX2Q03828 476 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 KRT32Q14532 448 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 NTRK3Q16288 839 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 CCDC158Q5M9N0 1113 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 SLC9C2Q5TAH2 1124 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 CNNM1Q9NRU3 951 aa8.61□□□□□ -1.03
NPHP1-209ENST00000461707 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
NPHP1-209ENST00000461707 NTSR2O95665 410 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-209ENST00000461707 TYRO3Q06418 890 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 MARCH10Q8NA82 808 aaPredicted RBP8.6□□□□□ -1.03
NPHP1-209ENST00000461707 LLPHQ9BRT6 129 aaKnown RBP8.6□□□□□ -1.03
NPHP1-209ENST00000461707 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 H3BQV1 296 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 TM4SF1P30408 202 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 ANO6Q4KMQ2 910 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 BCL2L12Q9HB09 334 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 PYCARDQ9ULZ3 195 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 ATP6V1DQ9Y5K8 247 aa8.6□□□□□ -1.03
NPHP1-209ENST00000461707 ZSWIM8A7E2V4 1837 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms