RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 MRPL14Q6P1L8 145 aaKnown RBP10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 UNC5CLQ8IV45 518 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 PRDM11Q9NQV5 511 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 DMGDHQ9UI17 866 aaKnown RBP10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 GPC6Q9Y625 555 aaPredicted RBP10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 COL18A1P39060 1754 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 LMO7Q8WWI1 1683 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 COL14A1Q05707 1796 aaKnown RBP10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 NRAPQ86VF7 1730 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 MICAL2O94851 1124 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 MAPK8P45983 427 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 LAPTM4AQ15012 233 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 WDR44Q5JSH3 913 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 C6orf118Q5T5N4 469 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 IER5Q5VY09 327 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 ZNF280CQ8ND82 737 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 NIF3L1Q9GZT8 377 aa10.93□□□□□ -0.66
ECHDC1-212ENST00000461239 GFRA3O60609 400 aa10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 LDHBP07195 334 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 MRPL58Q14197 206 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 HIF1AQ16665 826 aa10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 GPR152Q8TDT2 470 aa10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 COG3Q96JB2 828 aa10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 HSH2DQ96JZ2 352 aa10.92□□□□□ -0.66
ECHDC1-212ENST00000461239 AATKQ6ZMQ8 1374 aa10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 OPLAHO14841 1288 aa10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 AVPP01185 164 aa10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 TATP17735 454 aaPredicted RBP10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 LYSMD3Q7Z3D4 306 aa10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 TRPC5Q9UL62 973 aaPredicted RBP10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
ECHDC1-212ENST00000461239 GLI3P10071 1580 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 CGNL1Q0VF96 1302 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 PRPF40AO75400 957 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 TCF3P15923 654 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 RRS1Q15050 365 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 VPS72Q15906 364 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 ENOX2Q16206 610 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 WWC3Q9ULE0 1092 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 PDZRN3Q9UPQ7 1066 aa10.9□□□□□ -0.66
ECHDC1-212ENST00000461239 RXRBP28702 533 aa10.89□□□□□ -0.67
ECHDC1-212ENST00000461239 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-212ENST00000461239 SETDB2Q96T68 719 aa10.89□□□□□ -0.67
ECHDC1-212ENST00000461239 RNF19AQ9NV58 838 aa10.89□□□□□ -0.67
ECHDC1-212ENST00000461239 FAM13BQ9NYF5 915 aa10.89□□□□□ -0.67
ECHDC1-212ENST00000461239 SPATA31A5Q5VU36 1347 aa10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 SPATA31A7Q8IWB4 1347 aa10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 BMP1P13497 986 aa10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 IDH3AP50213 366 aa10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 DUSP9Q99956 384 aaKnown RBP10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 RGPD5Q99666 1765 aa10.88□□□□□ -0.67
ECHDC1-212ENST00000461239 PEAK1Q9H792 1746 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 RGS12O14924 1447 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 A6NHS1 94 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 TTLL8A6PVC2 850 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 PCSK2P16519 638 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 RHOQP17081 205 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 HOXC9P31274 260 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 FGD1P98174 961 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 BICDL1Q6ZP65 573 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 TRIM46Q7Z4K8 759 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 IP6K1Q92551 441 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 STRN4Q9NRL3 753 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 PARP2Q9UGN5 583 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 KNSTRNQ9Y448 316 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 LTN1O94822 1766 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 EP400Q96L91 3159 aa10.87□□□□□ -0.67
ECHDC1-212ENST00000461239 SPATA31A1Q5TZJ5 1347 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 ABCC6O95255 1503 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 PNMA6FA0A0J9YX94 578 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 MSX1P28360 303 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 INPP5BP32019 993 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 ORC1Q13415 861 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 CFHR5Q9BXR6 569 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 ANKIB1Q9P2G1 1089 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 POLKQ9UBT6 870 aa10.86□□□□□ -0.67
ECHDC1-212ENST00000461239 ANKRD26Q9UPS8 1709 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 RPLP1P05386 114 aaKnown RBP10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 ATP2B2Q01814 1243 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 LDLRAD1Q5T700 205 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 BTLAQ7Z6A9 289 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 PIK3R5Q8WYR1 880 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 FAM161BQ96MY7 647 aa10.85□□□□□ -0.67
ECHDC1-212ENST00000461239 CSRNP1Q96S65 589 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms