RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 SLC9C2Q5TAH2 1124 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 PANK1Q8TE04 598 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 GNAT2P19087 354 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
EPB41-208ENST00000460378 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 NUP133Q8WUM0 1156 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 ANO2Q9NQ90 1003 aa11.71□□□□□ -0.53
EPB41-208ENST00000460378 TRIM75PA6NK02 468 aa11.71□□□□□ -0.54
EPB41-208ENST00000460378 CCDC129Q6ZRS4 1044 aa11.71□□□□□ -0.54
EPB41-208ENST00000460378 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.54
EPB41-208ENST00000460378 SKIV2LQ15477 1246 aaKnown RBP11.71□□□□□ -0.54
EPB41-208ENST00000460378 MAGEB6Q8N7X4 407 aa11.71□□□□□ -0.54
EPB41-208ENST00000460378 SLKQ9H2G2 1235 aaPredicted RBP11.71□□□□□ -0.54
EPB41-208ENST00000460378 GPRC5DQ9NZD1 345 aa11.71□□□□□ -0.54
EPB41-208ENST00000460378 PNMA2Q9UL42 364 aa11.71□□□□□ -0.54
EPB41-208ENST00000460378 BTDP43251 543 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
EPB41-208ENST00000460378 PROSER3Q2NL68 480 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.541e-8■■□□□ 11.8
EPB41-208ENST00000460378 TM4SF1P30408 202 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 DHX36Q9H2U1 1008 aaKnown RBP11.7□□□□□ -0.54
EPB41-208ENST00000460378 KDRP35968 1356 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 NALCNQ8IZF0 1738 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 NCLP19338 710 aaKnown RBP11.7□□□□□ -0.54
EPB41-208ENST00000460378 ZHX2Q9Y6X8 837 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 FAM47CQ5HY64 1035 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
EPB41-208ENST00000460378 MINPP1Q9UNW1 487 aa11.7□□□□□ -0.54
EPB41-208ENST00000460378 SLFN5Q08AF3 891 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 NKX2-3Q8TAU0 364 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 KAT14Q9H8E8 782 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 RAD50Q92878 1312 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 A0A1B0GUL7 405 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 RASA3Q14644 834 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 MIGA1Q8NAN2 632 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 BMS1Q14692 1282 aaKnown RBP11.69□□□□□ -0.54
EPB41-208ENST00000460378 MAPKAPK5Q8IW41 473 aa11.69□□□□□ -0.54
EPB41-208ENST00000460378 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
EPB41-208ENST00000460378 GTF3C2Q8WUA4 911 aaPredicted RBP11.68□□□□□ -0.54
EPB41-208ENST00000460378 TGFBRAP1Q8WUH2 860 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 ARHGAP45Q92619 1136 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
EPB41-208ENST00000460378 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 TFCP2Q12800 502 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 CTCFLQ8NI51 663 aaPredicted RBP11.68□□□□□ -0.54
EPB41-208ENST00000460378 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 KBTBD13C9JR72 458 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 VAMP4O75379 141 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 CERKLQ49MI3 558 aaPredicted RBP11.68□□□□□ -0.54
EPB41-208ENST00000460378 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
EPB41-208ENST00000460378 GCC1Q96CN9 775 aa11.68□□□□□ -0.54
EPB41-208ENST00000460378 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 KIAA1210Q9ULL0 1709 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 WDR33Q9C0J8 1336 aaKnown RBP11.67□□□□□ -0.54
EPB41-208ENST00000460378 PDE8BO95263 885 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 NTSR2O95665 410 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 ASNSP08243 561 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 MAP2K2P36507 400 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 KIF23Q02241 960 aaPredicted RBP11.67□□□□□ -0.54
EPB41-208ENST00000460378 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
EPB41-208ENST00000460378 G2E3Q7L622 706 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 FAM184AQ8NB25 1140 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 TMEM57Q8N5G2 664 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
EPB41-208ENST00000460378 CHURC1Q8WUH1 139 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
EPB41-208ENST00000460378 FLOT1O75955 427 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 PTGER2P43116 358 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 CPXCR1Q8N123 301 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 ISCA1Q9BUE6 129 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 USP17L5A8MUK1 530 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 REC8O95072 547 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 ANKRD35Q8N283 1001 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 ECHDC1Q9NTX5 307 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
EPB41-208ENST00000460378 ZBED9Q6R2W3 1325 aa11.66□□□□□ -0.54
EPB41-208ENST00000460378 LBX1P52954 281 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
EPB41-208ENST00000460378 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.54
EPB41-208ENST00000460378 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 TRIM22Q8IYM9 498 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 ZNF213O14771 459 aa11.65□□□□□ -0.54
EPB41-208ENST00000460378 MFSD6Q6ZSS7 791 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms