RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 AMPD1P23109 780 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 GJA8P48165 433 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 ARL4DP49703 201 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 LMNB2Q03252 620 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 SNAP47Q5SQN1 464 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 SULF2Q8IWU5 870 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 GOLM1Q8NBJ4 401 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 CYP8B1Q9UNU6 501 aa8.54□□□□□ -1.04
CCDC50-203ENST00000460064 BCRP11274 1271 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 ARNTP27540 789 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 BAG6P46379 1132 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 GSTM4Q03013 218 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 LRRC14Q15048 493 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 WFDC8Q8IUA0 241 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 STK35Q8TDR2 534 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 JARID2Q92833 1246 aaPredicted RBP8.53□□□□□ -1.04
CCDC50-203ENST00000460064 EAF1Q96JC9 268 aaPredicted RBP8.53□□□□□ -1.04
CCDC50-203ENST00000460064 RHOVQ96L33 236 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 GMLQ99445 158 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 EMILIN2Q9BXX0 1053 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 SUPT16HQ9Y5B9 1047 aaKnown RBP8.53□□□□□ -1.04
CCDC50-203ENST00000460064 PCDHB5Q9Y5E4 795 aa8.53□□□□□ -1.04
CCDC50-203ENST00000460064 SLURP2P0DP57 97 aa8.52□□□□□ -1.05
CCDC50-203ENST00000460064 HGSNATQ68CP4 663 aa8.52□□□□□ -1.05
CCDC50-203ENST00000460064 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
CCDC50-203ENST00000460064 GRIN3AQ8TCU5 1115 aa8.52□□□□□ -1.05
CCDC50-203ENST00000460064 UBXN4Q92575 508 aa8.52□□□□□ -1.05
CCDC50-203ENST00000460064 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
CCDC50-203ENST00000460064 SHISA8B8ZZ34 492 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 GREM1O60565 184 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 ATF4P18848 351 aaPredicted RBP8.51□□□□□ -1.05
CCDC50-203ENST00000460064 GARTP22102 1010 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 PIP4K2BP78356 416 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 C19orf57Q0VDD7 668 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 TRIM42Q8IWZ5 723 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 RASGRP4Q8TDF6 673 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 SPATA32Q96LK8 384 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 NT5C1AQ9BXI3 368 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 LRRC4BQ9NT99 713 aa8.51□□□□□ -1.05
CCDC50-203ENST00000460064 FSCN2O14926 492 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
CCDC50-203ENST00000460064 GTF2F1P35269 517 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC50-203ENST00000460064 GMPRP36959 345 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 AP3B2Q13367 1082 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 RASIP1Q5U651 963 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 DIEXFQ68CQ4 756 aaKnown RBP8.5□□□□□ -1.05
CCDC50-203ENST00000460064 LLGL2Q6P1M3 1020 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 WNT8BQ93098 351 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC50-203ENST00000460064 SOX17Q9H6I2 414 aaPredicted RBP8.5□□□□□ -1.05
CCDC50-203ENST00000460064 OSGEPQ9NPF4 335 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 KCNQ5Q9NR82 932 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 UBP1Q9NZI7 540 aa8.5□□□□□ -1.05
CCDC50-203ENST00000460064 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
CCDC50-203ENST00000460064 WFS1O76024 890 aa8.49□□□□□ -1.05
CCDC50-203ENST00000460064 CYP11A1P05108 521 aa8.49□□□□□ -1.05
CCDC50-203ENST00000460064 BNC2Q6ZN30 1099 aaPredicted RBP8.49□□□□□ -1.05
CCDC50-203ENST00000460064 DMRTC2Q8IXT2 367 aaPredicted RBP8.49□□□□□ -1.05
CCDC50-203ENST00000460064 DHX38Q92620 1227 aaKnown RBP8.49□□□□□ -1.05
CCDC50-203ENST00000460064 KCNB2Q92953 911 aa8.49□□□□□ -1.05
CCDC50-203ENST00000460064 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
CCDC50-203ENST00000460064 ZC3H12CQ9C0D7 883 aaKnown RBP8.49□□□□□ -1.05
CCDC50-203ENST00000460064 LOC105371045A0A1W2PR82 267 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 F13A1P00488 732 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
CCDC50-203ENST00000460064 APOBRQ0VD83 1088 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 SEPT6Q14141 434 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 MAP1SQ66K74 1059 aaPredicted RBP8.48□□□□□ -1.05
CCDC50-203ENST00000460064 FAM196AQ6ZSG2 479 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 CCDC84Q86UT8 332 aaPredicted RBP8.48□□□□□ -1.05
CCDC50-203ENST00000460064 NKD1Q969G9 470 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 KLHDC7BQ96G42 594 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 SEC16BQ96JE7 1060 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 EFR3BQ9Y2G0 817 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 SHROOM4Q9ULL8 1493 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
CCDC50-203ENST00000460064 TLR3O15455 904 aaKnown RBP8.47□□□□□ -1.05
CCDC50-203ENST00000460064 NASPP49321 788 aaPredicted RBP8.47□□□□□ -1.05
CCDC50-203ENST00000460064 POU4F3Q15319 338 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 MCF2L2Q86YR7 1114 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 WHAMMQ8TF30 809 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 GATAD2BQ8WXI9 593 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 CORO1BQ9BR76 489 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 RRAGCQ9HB90 399 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
CCDC50-203ENST00000460064 ZNF252P-AS1Q0IIN9 211 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 NEDD1Q8NHV4 660 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 FBXO27Q8NI29 283 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
CCDC50-203ENST00000460064 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC50-203ENST00000460064 NID1P14543 1247 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms