RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 BCORQ6W2J9 1755 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 MAST3O60307 1309 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 MAP3K15Q6ZN16 1313 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 FAM237AA0A1B0GTK4 181 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 PSDA5PKW4 1024 aaPredicted RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 BECN2A8MW95 431 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 IKBKBO14920 756 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 CCP110O43303 1012 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 NRDCO43847 1150 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 TPM4P67936 248 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 DMTNQ08495 405 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 COL9A3Q14050 684 aaPredicted RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 TXNRD1Q16881 649 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 IMMTQ16891 758 aaKnown RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 SLFNL1Q499Z3 407 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC158Q5M9N0 1113 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 RC3H1Q5TC82 1133 aaKnown RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 NYAP1Q6ZVC0 841 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 DDX46Q7L014 1031 aaKnown RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 LINC00301Q8NCQ3 95 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC150Q8NCX0 1101 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC112Q8NEF3 446 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 FBXO18Q8NFZ0 1043 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 SLC16A10Q8TF71 515 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 CACTINQ8WUQ7 758 aaKnown RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 PIGBQ92521 554 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 EDC3Q96F86 508 aaKnown RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 PKNOX2Q96KN3 472 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 DNAJC2Q99543 621 aaKnown RBP7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 ISCA1Q9BUE6 129 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 OGFRQ9NZT2 677 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 KIAA1468Q9P260 1216 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 CEP126Q9P2H0 1117 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 PRDM4Q9UKN5 801 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 BRWD3Q6RI45 1802 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 TIAM2Q8IVF5 1701 aa7.13□□□□□ -1.27
UBQLN4-202ENST00000459954 ZMYM6O95789 1325 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CDHR2Q9BYE9 1310 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 MYH13Q9UKX3 1938 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 A0A1B0GUL7 405 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 NBPF26B4DH59 902 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 GOLIM4O00461 696 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 RGL2O15211 777 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 KCNQ2O43526 872 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CDKL5O76039 1030 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 KIF20AO95235 890 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 STARD3NLO95772 234 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CSF1RP07333 972 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CMA1P23946 247 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 APOBRQ0VD83 1088 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 PTPN14Q15678 1187 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 PPP4R3BQ5MIZ7 849 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CEP135Q66GS9 1140 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC129Q6ZRS4 1044 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 C11orf57Q6ZUT1 292 aaPredicted RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CREBRFQ8IUR6 639 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 DHX40Q8IX18 779 aaKnown RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 MB21D2Q8IYB1 491 aaPredicted RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 C17orf53Q8N3J3 647 aaPredicted RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 FSIP1Q8NA03 581 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 NCOA7Q8NI08 942 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 APPBP2Q92624 585 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 DDX11Q96FC9 970 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 SEC62Q99442 399 aaKnown RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 MTA3Q9BTC8 594 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 GOLPH3LQ9H4A5 285 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 NRBP1Q9UHY1 535 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 PCDHA7Q9UN72 937 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 CHMP3Q9Y3E7 222 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 MORC2Q9Y6X9 1032 aaPredicted RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 RGPD3A6NKT7 1758 aaPredicted RBP7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 LAMB2P55268 1798 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 RGPD4Q7Z3J3 1758 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 DLEC1Q9Y238 1755 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 TOGARAM1Q9Y4F4 1720 aa7.12□□□□□ -1.27
UBQLN4-202ENST00000459954 NID2Q14112 1375 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 SPTLC2O15270 562 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 PPP6R2O75170 966 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 PCCAP05165 728 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 SKILP12757 684 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 FDPSP14324 419 aaKnown RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 ZSCAN20P17040 1043 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 ME1P48163 572 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 SIK1P57059 783 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 NLRP12P59046 1061 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 CCZ1BP86790 482 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 CCZ1P86791 482 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 EN1Q05925 392 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 GABPB1Q06547 395 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 NCBP1Q09161 790 aaKnown RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 TCIRG1Q13488 830 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 TTF1Q15361 905 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 ZRSR1Q15695 479 aaKnown RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 ALX1Q15699 326 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 TPD52L1Q16890 204 aaPredicted RBP7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 CCDC144BQ3MJ40 725 aa7.11□□□□□ -1.27
UBQLN4-202ENST00000459954 FAM182BQ5T319 152 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms