RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
CAPN13-203ENST00000458085 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
CAPN13-203ENST00000458085 GRAPQ13588 217 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 ZNF827Q17R98 1081 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 CDC37L1Q7L3B6 337 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 IFNL3Q8IZI9 196 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 GRAPLQ8TC17 118 aaPredicted RBP19.34■□□□□ 0.69
CAPN13-203ENST00000458085 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 CACNA1SQ13698 1873 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 FSD2A1L4K1 749 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 PATL2C9JE40 543 aaKnown RBP19.34■□□□□ 0.69
CAPN13-203ENST00000458085 PRC1O43663 620 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 NCOA7Q8NI08 942 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 ZNF384Q8TF68 577 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 NCOA5Q9HCD5 579 aaKnown RBP19.34■□□□□ 0.69
CAPN13-203ENST00000458085 RAI14Q9P0K7 980 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 CNPY2Q9Y2B0 182 aa19.34■□□□□ 0.69
CAPN13-203ENST00000458085 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.69
CAPN13-203ENST00000458085 CTDNEP1O95476 244 aa19.33■□□□□ 0.68
CAPN13-203ENST00000458085 CYP7A1P22680 504 aa19.33■□□□□ 0.68
CAPN13-203ENST00000458085 TACC3Q9Y6A5 838 aa19.33■□□□□ 0.68
CAPN13-203ENST00000458085 PDIA3P30101 505 aaKnown RBP19.32■□□□□ 0.68
CAPN13-203ENST00000458085 ALX1Q15699 326 aa19.32■□□□□ 0.68
CAPN13-203ENST00000458085 CAVIN1Q6NZI2 390 aaKnown RBP19.32■□□□□ 0.68
CAPN13-203ENST00000458085 DDX11Q96FC9 970 aa19.32■□□□□ 0.68
CAPN13-203ENST00000458085 NAP1L2Q9ULW6 460 aaPredicted RBP19.32■□□□□ 0.68
CAPN13-203ENST00000458085 HIBADHP31937 336 aaKnown RBP19.32■□□□□ 0.68
CAPN13-203ENST00000458085 MCM5P33992 734 aa19.32■□□□□ 0.68
CAPN13-203ENST00000458085 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
CAPN13-203ENST00000458085 GAS2L3Q86XJ1 694 aa19.32■□□□□ 0.68
CAPN13-203ENST00000458085 FBXL16Q8N461 479 aa19.32■□□□□ 0.68
CAPN13-203ENST00000458085 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
CAPN13-203ENST00000458085 MYH13Q9UKX3 1938 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 PPFIA3O75145 1194 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 GADD45BO75293 160 aaPredicted RBP19.31■□□□□ 0.68
CAPN13-203ENST00000458085 CYB5R4Q7L1T6 521 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 RALYLQ86SE5 291 aaKnown RBP19.31■□□□□ 0.68
CAPN13-203ENST00000458085 BRPF3Q9ULD4 1205 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 JAG2Q9Y219 1238 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 SLC4A4Q9Y6R1 1079 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 PNPLA7Q6ZV29 1317 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 POLRMTO00411 1230 aaKnown RBP19.31■□□□□ 0.68
CAPN13-203ENST00000458085 APBA3O96018 575 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 CTDSPL2Q05D32 466 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 FERMT3Q86UX7 667 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 NSUN7Q8NE18 718 aaKnown RBP19.31■□□□□ 0.68
CAPN13-203ENST00000458085 SMARCC2Q8TAQ2 1214 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 NAPBQ9H115 298 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 NEDD4P46934 1319 aa19.31■□□□□ 0.68
CAPN13-203ENST00000458085 ZNF274Q96GC6 653 aaPredicted RBP19.3■□□□□ 0.68
CAPN13-203ENST00000458085 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
CAPN13-203ENST00000458085 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
CAPN13-203ENST00000458085 GOLGA6L3A6NEY3 463 aa19.3■□□□□ 0.68
CAPN13-203ENST00000458085 EVCP57679 992 aa19.3■□□□□ 0.68
CAPN13-203ENST00000458085 DNM1Q05193 864 aaKnown RBP19.3■□□□□ 0.68
CAPN13-203ENST00000458085 RAB11FIP4Q86YS3 637 aa19.3■□□□□ 0.68
CAPN13-203ENST00000458085 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
CAPN13-203ENST00000458085 ZMYM6O95789 1325 aa19.3■□□□□ 0.68
CAPN13-203ENST00000458085 B4E1Z4 1266 aa19.29■□□□□ 0.68
CAPN13-203ENST00000458085 ST5P78524 1137 aa19.29■□□□□ 0.68
CAPN13-203ENST00000458085 CHAF1AQ13111 956 aaPredicted RBP19.29■□□□□ 0.68
CAPN13-203ENST00000458085 FAM173BQ6P4H8 233 aa19.29■□□□□ 0.68
CAPN13-203ENST00000458085 SDR42E1Q8WUS8 393 aa19.29■□□□□ 0.68
CAPN13-203ENST00000458085 PDCP20941 246 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
CAPN13-203ENST00000458085 RIOK1Q9BRS2 568 aaKnown RBP19.28■□□□□ 0.68
CAPN13-203ENST00000458085 CHD4Q14839 1912 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 PTPDC1A2A3K4 754 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 SEMA3EO15041 775 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 PLSCR1O15162 318 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 TRDNQ13061 729 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 COL23A1Q86Y22 540 aaPredicted RBP19.28■□□□□ 0.68
CAPN13-203ENST00000458085 AKT1S1Q96B36 256 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 HPS5Q9UPZ3 1129 aa19.28■□□□□ 0.68
CAPN13-203ENST00000458085 MAGEB6P1A0A0J9YX57 407 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 KLF18A0A0U1RQI7 1052 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 SMIM22K7EJ46 135 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 PRDX5P30044 214 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 LLPHQ9BRT6 129 aaKnown RBP19.27■□□□□ 0.68
CAPN13-203ENST00000458085 SENP2Q9HC62 589 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 SALL1Q9NSC2 1324 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 FIBPO43427 364 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 GNAT2P19087 354 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 TDO2P48775 406 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 STK11IPQ8N1F8 1099 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 TMEM87AQ8NBN3 555 aa19.27■□□□□ 0.68
CAPN13-203ENST00000458085 NSUN4Q96CB9 384 aaKnown RBP19.27■□□□□ 0.68
CAPN13-203ENST00000458085 FOSBP53539 338 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 GPSM2P81274 684 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 MECOMQ03112 1051 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 NAA16Q6N069 864 aaPredicted RBP19.26■□□□□ 0.67
CAPN13-203ENST00000458085 ATP6V1DQ9Y5K8 247 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 XDHP47989 1333 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 WDR19Q8NEZ3 1342 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 RXRBP28702 533 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 ZSCAN23Q3MJ62 389 aa19.26■□□□□ 0.67
CAPN13-203ENST00000458085 PDS5AQ29RF7 1337 aaKnown RBP19.25■□□□□ 0.67
CAPN13-203ENST00000458085 XRCC6P12956 609 aaKnown RBP eCLIP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms