RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
USP39-207ENST00000450066 APPP05067 770 aa16.95■□□□□ 0.3
USP39-207ENST00000450066 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
USP39-207ENST00000450066 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
USP39-207ENST00000450066 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
USP39-207ENST00000450066 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
USP39-207ENST00000450066 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
USP39-207ENST00000450066 ZNF213O14771 459 aa16.94■□□□□ 0.3
USP39-207ENST00000450066 IL1R1P14778 569 aa16.94■□□□□ 0.3
USP39-207ENST00000450066 NAA16Q6N069 864 aaPredicted RBP16.94■□□□□ 0.3
USP39-207ENST00000450066 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
USP39-207ENST00000450066 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
USP39-207ENST00000450066 NSUN4Q96CB9 384 aaKnown RBP16.94■□□□□ 0.3
USP39-207ENST00000450066 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
USP39-207ENST00000450066 PDGFDQ9GZP0 370 aaPredicted RBP16.94■□□□□ 0.3
USP39-207ENST00000450066 SH2B1Q9NRF2 756 aaPredicted RBP16.94■□□□□ 0.3
USP39-207ENST00000450066 C6orf229H3BNL8 230 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
USP39-207ENST00000450066 LCORLQ8N3X6 602 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 ZNF384Q8TF68 577 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
USP39-207ENST00000450066 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 MAGEB6P1A0A0J9YX57 407 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 MECOMQ03112 1051 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
USP39-207ENST00000450066 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP39-207ENST00000450066 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 HAND2P61296 217 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
USP39-207ENST00000450066 NBR1Q14596 966 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 IFNL3Q8IZI9 196 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 MPNDQ8N594 471 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 TCEANC2Q96MN5 208 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 RIOK1Q9BRS2 568 aaKnown RBP16.92■□□□□ 0.3
USP39-207ENST00000450066 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
USP39-207ENST00000450066 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 PRDX5P30044 214 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 EXOSC10Q01780 885 aaKnown RBP16.92■□□□□ 0.3
USP39-207ENST00000450066 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
USP39-207ENST00000450066 NUCB2P80303 420 aa16.91■□□□□ 0.3
USP39-207ENST00000450066 DPP8Q6V1X1 898 aaPredicted RBP16.91■□□□□ 0.3
USP39-207ENST00000450066 NAPBQ9H115 298 aa16.91■□□□□ 0.3
USP39-207ENST00000450066 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
USP39-207ENST00000450066 MAST2Q6P0Q8 1798 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 JAG2Q9Y219 1238 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 LAMA4Q16363 1823 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 PRKAB2O43741 272 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 LARGE1O95461 756 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
USP39-207ENST00000450066 ME3Q16798 604 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 Q6ZUG5 572 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 NBPF3Q9H094 633 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
USP39-207ENST00000450066 DUOX1Q9NRD9 1551 aa16.9■□□□□ 0.3
USP39-207ENST00000450066 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
USP39-207ENST00000450066 FBXL16Q8N461 479 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 NCOA7Q8NI08 942 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 C10orf71Q711Q0 1435 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 CHRNA5P30532 468 aa16.89■□□□□ 0.29
USP39-207ENST00000450066 ZC3H12CQ9C0D7 883 aaKnown RBP16.89■□□□□ 0.29
USP39-207ENST00000450066 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
USP39-207ENST00000450066 TDO2P48775 406 aa16.88■□□□□ 0.29
USP39-207ENST00000450066 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
USP39-207ENST00000450066 WDR19Q8NEZ3 1342 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 MCM5P33992 734 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 GSTO1P78417 241 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 FGD1P98174 961 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 TRDNQ13061 729 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
USP39-207ENST00000450066 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 MB21D2Q8IYB1 491 aaPredicted RBP16.87■□□□□ 0.29
USP39-207ENST00000450066 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 FAM205AQ6ZU69 1335 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
USP39-207ENST00000450066 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 CCDC83Q8IWF9 413 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 BRF1Q92994 677 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 EYA3Q99504 573 aa16.87■□□□□ 0.29
USP39-207ENST00000450066 RIMBP2O15034 1052 aa16.86■□□□□ 0.29
USP39-207ENST00000450066 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
USP39-207ENST00000450066 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
USP39-207ENST00000450066 ST3GAL1Q11201 340 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 SDR42E1Q8WUS8 393 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 C7orf43Q8WVR3 580 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 AATFQ9NY61 560 aaKnown RBP eCLIP16.85■□□□□ 0.29
USP39-207ENST00000450066 PKP1Q13835 747 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 NECAB1Q8N987 351 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
USP39-207ENST00000450066 SMC3Q9UQE7 1217 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 TIAM2Q8IVF5 1701 aa16.85■□□□□ 0.29
USP39-207ENST00000450066 PRC1O43663 620 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms