RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 PTPN22Q9Y2R2 807 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 MAP3K2Q9Y2U5 619 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 ECM29Q5VYK3 1845 aa12.83□□□□□ -0.36
LINC02561-201ENST00000449457 LAMB1P07942 1786 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 TESPA1A2RU30 521 aaPredicted RBP12.82□□□□□ -0.36
LINC02561-201ENST00000449457 NBPF12Q5TAG4 269 aaPredicted RBP12.82□□□□□ -0.36
LINC02561-201ENST00000449457 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 APOBEC3FQ8IUX4 373 aaKnown RBP12.82□□□□□ -0.36
LINC02561-201ENST00000449457 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 C8orf58Q8NAV2 365 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 TTLL11Q8NHH1 800 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 ZBED3Q96IU2 234 aaPredicted RBP12.82□□□□□ -0.36
LINC02561-201ENST00000449457 DEFB129Q9H1M3 183 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 PTCH2Q9Y6C5 1203 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 COL6A3P12111 3177 aa12.82□□□□□ -0.36
LINC02561-201ENST00000449457 NOM1Q5C9Z4 860 aaKnown RBP12.81□□□□□ -0.36
LINC02561-201ENST00000449457 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
LINC02561-201ENST00000449457 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
LINC02561-201ENST00000449457 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
LINC02561-201ENST00000449457 HELBQ8NG08 1087 aaPredicted RBP12.81□□□□□ -0.36
LINC02561-201ENST00000449457 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
LINC02561-201ENST00000449457 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
LINC02561-201ENST00000449457 CFHR5Q9BXR6 569 aa12.81□□□□□ -0.36
LINC02561-201ENST00000449457 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
LINC02561-201ENST00000449457 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
LINC02561-201ENST00000449457 TAF5LO75529 589 aa12.8□□□□□ -0.36
LINC02561-201ENST00000449457 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
LINC02561-201ENST00000449457 SH3TC2Q8TF17 1288 aa12.8□□□□□ -0.36
LINC02561-201ENST00000449457 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
LINC02561-201ENST00000449457 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
LINC02561-201ENST00000449457 CEP290O15078 2479 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 H0YGN5 161 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 DPYSL4O14531 572 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 HOXB7P09629 217 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 G2E3Q7L622 706 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 COA1Q9GZY4 146 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
LINC02561-201ENST00000449457 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 LAMA3Q16787 3333 aa12.79□□□□□ -0.36
LINC02561-201ENST00000449457 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 DLGAP5Q15398 846 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 ARMC5Q96C12 935 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 ZNF333Q96JL9 665 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 PRMT6Q96LA8 375 aaPredicted RBP12.78□□□□□ -0.36
LINC02561-201ENST00000449457 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
LINC02561-201ENST00000449457 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
LINC02561-201ENST00000449457 ITGA6P23229 1130 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 KCNJ4P48050 445 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 SP3Q02447 781 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 CHRNDQ07001 517 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 SLC4A8Q2Y0W8 1093 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
LINC02561-201ENST00000449457 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 CD209Q9NNX6 404 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 IRS2Q9Y4H2 1338 aa12.77□□□□□ -0.37
LINC02561-201ENST00000449457 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
LINC02561-201ENST00000449457 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
LINC02561-201ENST00000449457 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
LINC02561-201ENST00000449457 ALDH1A1P00352 501 aa12.76□□□□□ -0.37
LINC02561-201ENST00000449457 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
LINC02561-201ENST00000449457 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
LINC02561-201ENST00000449457 RBM5P52756 815 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC02561-201ENST00000449457 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC02561-201ENST00000449457 SLC9C1Q4G0N8 1177 aa12.76□□□□□ -0.37
LINC02561-201ENST00000449457 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
LINC02561-201ENST00000449457 APAF1O14727 1248 aa12.75□□□□□ -0.37
LINC02561-201ENST00000449457 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
LINC02561-201ENST00000449457 RASA3Q14644 834 aa12.75□□□□□ -0.37
LINC02561-201ENST00000449457 MTFR1Q15390 333 aa12.75□□□□□ -0.37
LINC02561-201ENST00000449457 MAP3K11Q16584 847 aa12.75□□□□□ -0.37
LINC02561-201ENST00000449457 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
LINC02561-201ENST00000449457 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
LINC02561-201ENST00000449457 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
LINC02561-201ENST00000449457 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 TCP10L2B9ZVM9 353 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 PPP1R12BO60237 982 aaPredicted RBP12.74□□□□□ -0.37
LINC02561-201ENST00000449457 PLIN1O60240 522 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 CACNB3P54284 484 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
LINC02561-201ENST00000449457 GRIK5Q16478 980 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
LINC02561-201ENST00000449457 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
LINC02561-201ENST00000449457 LEMD3Q9Y2U8 911 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
LINC02561-201ENST00000449457 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
LINC02561-201ENST00000449457 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
LINC02561-201ENST00000449457 CTGFP29279 349 aa12.73□□□□□ -0.37
LINC02561-201ENST00000449457 VGLL4Q14135 290 aa12.73□□□□□ -0.37
LINC02561-201ENST00000449457 CCL15Q16663 113 aa12.73□□□□□ -0.37
LINC02561-201ENST00000449457 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
LINC02561-201ENST00000449457 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms