RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 CPLX1O14810 134 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 PDE8BO95263 885 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 CMA1P23946 247 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
RFX3-208ENST00000449234 ME1P48163 572 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 DNAJC10Q8IXB1 793 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
RFX3-208ENST00000449234 PIGBQ92521 554 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
RFX3-208ENST00000449234 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
RFX3-208ENST00000449234 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
RFX3-208ENST00000449234 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
RFX3-208ENST00000449234 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 FAM237AA0A1B0GTK4 181 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 SPTLC2O15270 562 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 FOXP2O15409 715 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 GPAA1O43292 621 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 PPP6R2O75170 966 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 CHGBP05060 677 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 ADORA1P30542 326 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 RCAN1P53805 252 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 CTSWP56202 376 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 GSDMDP57764 484 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 TPM4P67936 248 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 STK38Q15208 465 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
RFX3-208ENST00000449234 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
RFX3-208ENST00000449234 LPIN2Q92539 896 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 ANGEL1Q9UNK9 670 aaKnown RBP13.36□□□□□ -0.27
RFX3-208ENST00000449234 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
RFX3-208ENST00000449234 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
RFX3-208ENST00000449234 KIF2AO00139 706 aaPredicted RBP13.35□□□□□ -0.27
RFX3-208ENST00000449234 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
RFX3-208ENST00000449234 GNAT2P19087 354 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 ITGA6P23229 1130 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 LIFRP42702 1097 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
RFX3-208ENST00000449234 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 ZNF34Q8IZ26 560 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 VGLL2Q8N8G2 317 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 WASF1Q92558 559 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
RFX3-208ENST00000449234 PUS7LQ9H0K6 701 aaKnown RBP13.35□□□□□ -0.27
RFX3-208ENST00000449234 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 PYCARDQ9ULZ3 195 aa13.35□□□□□ -0.27
RFX3-208ENST00000449234 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
RFX3-208ENST00000449234 FGFR2P21802 821 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 PTGS1P23219 599 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 KCNJ6P48051 423 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 ANTXR2P58335 489 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 PPP2R5BQ15173 497 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
RFX3-208ENST00000449234 ANO1Q5XXA6 986 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 GOLPH3LQ9H4A5 285 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
RFX3-208ENST00000449234 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 MORC2Q9Y6X9 1032 aaPredicted RBP13.34□□□□□ -0.27
RFX3-208ENST00000449234 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
RFX3-208ENST00000449234 NID2Q14112 1375 aa13.33□□□□□ -0.27
RFX3-208ENST00000449234 ABCA3Q99758 1704 aa13.33□□□□□ -0.27
RFX3-208ENST00000449234 DISP2A7MBM2 1401 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 BCL9O00512 1426 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 RIC1Q4ADV7 1423 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 GOLGA8BA8MQT2 603 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 IKBKBO14920 756 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 GABBR2O75899 941 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 MCAMP43121 646 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 NLRP12P59046 1061 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 KIF23Q02241 960 aaPredicted RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 PUM3Q15397 648 aaKnown RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 SLC9C2Q5TAH2 1124 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 KRT23Q9C075 422 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 CCDC9Q9Y3X0 531 aaKnown RBP13.33□□□□□ -0.28
RFX3-208ENST00000449234 NWD2Q9ULI1 1742 aa13.33□□□□□ -0.28
RFX3-208ENST00000449234 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
RFX3-208ENST00000449234 EXOC5O00471 708 aa13.32□□□□□ -0.28
RFX3-208ENST00000449234 RGL2O15211 777 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms