RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 TDRD7Q8NHU6 1098 aaKnown RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 C8orf76Q96K31 380 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 DENND2AQ9ULE3 1009 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 R3HCC1Q9Y3T6 440 aaKnown RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 ZMYM6O95789 1325 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 RTL9Q8NET4 1388 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 CTAGE5O15320 804 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 SNW1Q13573 536 aaKnown RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 SPATA5Q8NB90 893 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 FBXO18Q8NFZ0 1043 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 NKX2-3Q8TAU0 364 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 STRBPQ96SI9 672 aaKnown RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 RTEL1Q9NZ71 1219 aa20.84■□□□□ 0.93
CLDN9-201ENST00000445369 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 ANGEL1Q9UNK9 670 aaKnown RBP20.84■□□□□ 0.93
CLDN9-201ENST00000445369 COL5A3P25940 1745 aaPredicted RBP20.83■□□□□ 0.93
CLDN9-201ENST00000445369 PARP10Q53GL7 1025 aa20.83■□□□□ 0.93
CLDN9-201ENST00000445369 CYB5R4Q7L1T6 521 aa20.83■□□□□ 0.93
CLDN9-201ENST00000445369 ENGASEQ8NFI3 743 aa20.83■□□□□ 0.93
CLDN9-201ENST00000445369 LOC102724428A0A0B4J2F2 783 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 SH2B2O14492 632 aaPredicted RBP20.82■□□□□ 0.92
CLDN9-201ENST00000445369 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 CAVIN2O95810 425 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 SIK1P57059 783 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 RASGRF1Q13972 1273 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 ALX1Q15699 326 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 OTUD7BQ6GQQ9 843 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 CCDC73Q6ZRK6 1079 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 RAB11FIP4Q86YS3 637 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 RGS22Q8NE09 1264 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 CPLX1O14810 134 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 APPP05067 770 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 TPM3P06753 285 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 FAM160A1Q05DH4 1040 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 ITPK1Q13572 414 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 AIDAQ96BJ3 306 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 ACSBG1Q96GR2 724 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 DNAJC25Q9H1X3 360 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 A0A1B0GUL6 1792 aa20.82■□□□□ 0.92
CLDN9-201ENST00000445369 ZNF165P49910 485 aa20.81■□□□□ 0.92
CLDN9-201ENST00000445369 MARCH10Q8NA82 808 aaPredicted RBP20.81■□□□□ 0.92
CLDN9-201ENST00000445369 NTSR2O95665 410 aa20.81■□□□□ 0.92
CLDN9-201ENST00000445369 ME1P48163 572 aa20.81■□□□□ 0.92
CLDN9-201ENST00000445369 BRAPQ7Z569 592 aa20.81■□□□□ 0.92
CLDN9-201ENST00000445369 CASZ1Q86V15 1759 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 NEDD4P46934 1319 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 FAM177BA6PVY3 158 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 GOLGA6L6A8MZA4 724 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 SNAP23O00161 211 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 CCDC152Q4G0S7 254 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 FSIP1Q8NA03 581 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 LINC00301Q8NCQ3 95 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 KCNF1Q9H3M0 494 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 EPB41L4AQ9HCS5 686 aaPredicted RBP20.8■□□□□ 0.92
CLDN9-201ENST00000445369 PCDHA7Q9UN72 937 aa20.8■□□□□ 0.92
CLDN9-201ENST00000445369 BCL9LQ86UU0 1499 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 B4E1Z4 1266 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 MAP3K12Q12852 859 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 MAGEB6Q8N7X4 407 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 TMEM87BQ96K49 555 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 COL4A1P02462 1669 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 A0A0G2JS52 829 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 A0A1W2PQ27 194 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 A0A1W2PQ64 194 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 A0A1W2PQD8 194 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 KINO60870 393 aaKnown RBP20.79■□□□□ 0.92
CLDN9-201ENST00000445369 PIP4K2BP78356 416 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 NOLC1Q14978 699 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLDN9-201ENST00000445369 MYSM1Q5VVJ2 828 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 ADALQ6DHV7 355 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 SPC24Q8NBT2 197 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 ZNF831Q5JPB2 1677 aa20.79■□□□□ 0.92
CLDN9-201ENST00000445369 PATL2C9JE40 543 aaKnown RBP20.78■□□□□ 0.92
CLDN9-201ENST00000445369 YEATS4O95619 227 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 METAP2P50579 478 aaKnown RBP eCLIP20.78■□□□□ 0.92
CLDN9-201ENST00000445369 STX1AQ16623 288 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 APOA5Q6Q788 366 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 PLA2G4DQ86XP0 818 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 IFNL3Q8IZI9 196 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 MRPS27Q92552 414 aaKnown RBP20.78■□□□□ 0.92
CLDN9-201ENST00000445369 SPTLC3Q9NUV7 552 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
CLDN9-201ENST00000445369 KIF28PB7ZC32 967 aa20.77■□□□□ 0.92
CLDN9-201ENST00000445369 MBD4O95243 580 aa20.77■□□□□ 0.92
CLDN9-201ENST00000445369 IGHMBP2P38935 993 aaKnown RBP20.77■□□□□ 0.92
CLDN9-201ENST00000445369 KIF23Q02241 960 aaPredicted RBP20.77■□□□□ 0.92
CLDN9-201ENST00000445369 GJB4Q9NTQ9 266 aa20.77■□□□□ 0.92
CLDN9-201ENST00000445369 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLDN9-201ENST00000445369 SPATA31A5Q5VU36 1347 aa20.77■□□□□ 0.92
CLDN9-201ENST00000445369 SPATA31A7Q8IWB4 1347 aa20.77■□□□□ 0.92
CLDN9-201ENST00000445369 NUTM2BA6NNL0 878 aaPredicted RBP20.77■□□□□ 0.92
CLDN9-201ENST00000445369 NUTM2EB1AL46 878 aaPredicted RBP20.77■□□□□ 0.92
CLDN9-201ENST00000445369 POLR3DP05423 398 aaPredicted RBP20.77■□□□□ 0.92
CLDN9-201ENST00000445369 IQCB1Q15051 598 aa20.77■□□□□ 0.92
CLDN9-201ENST00000445369 C11orf57Q6ZUT1 292 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms