RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 HHATQ5VTY9 493 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 MYLK4Q86YV6 388 aaPredicted RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 SLC17A8Q8NDX2 589 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 DYDC1Q8WWB3 177 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 TACO1Q9BSH4 297 aaKnown RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 ZBTB3Q9H5J0 574 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 SMC3Q9UQE7 1217 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 PCDHGA10Q9Y5H3 936 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 MYBBP1AQ9BQG0 1328 aaKnown RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 BRCA2P51587 3418 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 NAIPQ13075 1403 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 KDM5CP41229 1560 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 ITSN2Q9NZM3 1697 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 SNUPNO95149 360 aaKnown RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 MYBL2P10244 700 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 GCFC2P16383 781 aaKnown RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 PTGS1P23219 599 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 ENOX2Q16206 610 aaKnown RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 CWC27Q6UX04 472 aaKnown RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 NFATC2IPQ8NCF5 419 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 CCDC102AQ96A19 550 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 ZBTB10Q96DT7 871 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 KIF1BPQ96EK5 621 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 GPR101Q96P66 508 aaPredicted RBP3.2□□□□□ -1.9
LIG4-203ENST00000442234 LMBRD1Q9NUN5 540 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 RPS6KL1Q9Y6S9 549 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 RAD50Q92878 1312 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 PRR36Q9H6K5 1346 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 PLEKHG2Q9H7P9 1386 aa3.2□□□□□ -1.9
LIG4-203ENST00000442234 PPFIA2O75334 1257 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CELF2O95319 508 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 ERCC6LQ2NKX8 1250 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ARMC9Q7Z3E5 817 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 DNAJC10Q8IXB1 793 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 FAM177A1Q8N128 213 aaPredicted RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 STK11IPQ8N1F8 1099 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CCDC26Q8TAB7 109 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SNX21Q969T3 373 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 EXOC4Q96A65 974 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ZCCHC17Q9NP64 241 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 TRMT1Q9NXH9 659 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 ERVK-7P63135 1459 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ADGBQ8N7X0 1667 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 LOC102724428A0A0B4J2F2 783 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 GOLGA6L4A6NEF3 574 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 APBB1O00213 710 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 DPYSL4O14531 572 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 FOXN1O15353 648 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CDKL5O76039 1030 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 KIF4AO95239 1232 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 PTPREP23469 700 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 HUNKP57058 714 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SIK1P57059 783 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ATP2B2Q01814 1243 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SETDB1Q15047 1291 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SKIV2LQ15477 1246 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 TBC1D10BQ4KMP7 808 aaPredicted RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 CCDC181Q5TID7 509 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SULT6B1Q6IMI4 303 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SAAL1Q96ER3 474 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 KRTAP3-3Q9BYR6 98 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 KRTAP3-2Q9BYR7 98 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 IQCGQ9H095 443 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 TMEM165Q9HC07 324 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ARFGAP3Q9NP61 516 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 FZD1Q9UP38 647 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 EIF3AQ14152 1382 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 ENO4A6NNW6 628 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 EBAG9O00559 213 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 NUDT7P0C024 238 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 INPP5BP32019 993 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 DEFB115Q30KQ5 88 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 GET4Q7L5D6 327 aaPredicted RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 GAS2L2Q8NHY3 880 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 L3MBTL2Q969R5 705 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 TSPAN18Q96SJ8 248 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CLIP2Q9UDT6 1046 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 NOTCH2Q04721 2471 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ROCK1Q13464 1354 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CCDC171Q6TFL3 1326 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 EVC2Q86UK5 1308 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SEMA3EO15041 775 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CA8P35219 290 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CORO7P57737 925 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 DCTN1Q14203 1278 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 MCM6Q14566 821 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 SLFNL1Q499Z3 407 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CIAPIN1Q6FI81 312 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 IQCA1Q86XH1 822 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 DZIP1Q86YF9 867 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 FAM114A1Q8IWE2 563 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CDAN1Q8IWY9 1227 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 PANK1Q8TE04 598 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 RSRC1Q96IZ7 334 aaKnown RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 CABS1Q96KC9 395 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ZNF396Q96N95 335 aaPredicted RBP3.19□□□□□ -1.9
LIG4-203ENST00000442234 UIMC1Q96RL1 719 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 RUFY1Q96T51 708 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 ZBED2Q9BTP6 218 aa3.19□□□□□ -1.9
LIG4-203ENST00000442234 CDCA7Q9BWT1 371 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms