RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
LINC00354-202ENST00000440860 PPP4R2Q9NY27 417 aa9.09□□□□□ -0.95
LINC00354-202ENST00000440860 TMEM238LA0A1B0GVL6 79 aa9.08□□□□□ -0.96
LINC00354-202ENST00000440860 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
LINC00354-202ENST00000440860 USP11P51784 963 aa9.08□□□□□ -0.96
LINC00354-202ENST00000440860 NFIAQ12857 509 aa9.08□□□□□ -0.96
LINC00354-202ENST00000440860 LRP8Q14114 963 aa9.08□□□□□ -0.96
LINC00354-202ENST00000440860 DDX54Q8TDD1 881 aaKnown RBP9.08□□□□□ -0.96
LINC00354-202ENST00000440860 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
LINC00354-202ENST00000440860 RAD18Q9NS91 495 aa9.08□□□□□ -0.96
LINC00354-202ENST00000440860 ITPKAP23677 461 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 MAP4P27816 1152 aaKnown RBP9.07□□□□□ -0.96
LINC00354-202ENST00000440860 SSTR4P31391 388 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 GRM2Q14416 872 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 RNF43Q68DV7 783 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 PI16Q6UXB8 463 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
LINC00354-202ENST00000440860 CTSBP07858 339 aa9.06□□□□□ -0.96
LINC00354-202ENST00000440860 NFKBIBQ15653 356 aa9.06□□□□□ -0.96
LINC00354-202ENST00000440860 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
LINC00354-202ENST00000440860 SUGCTQ9HAC7 445 aa9.06□□□□□ -0.96
LINC00354-202ENST00000440860 ABCB6Q9NP58 842 aa9.06□□□□□ -0.96
LINC00354-202ENST00000440860 HIF3AQ9Y2N7 669 aa9.06□□□□□ -0.96
LINC00354-202ENST00000440860 ECEL1O95672 775 aa9.05□□□□□ -0.96
LINC00354-202ENST00000440860 B3GALT4O96024 378 aa9.05□□□□□ -0.96
LINC00354-202ENST00000440860 FCGRTP55899 365 aa9.05□□□□□ -0.96
LINC00354-202ENST00000440860 SOX4Q06945 474 aaPredicted RBP9.05□□□□□ -0.96
LINC00354-202ENST00000440860 DTHD1Q6ZMT9 781 aa9.05□□□□□ -0.96
LINC00354-202ENST00000440860 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
LINC00354-202ENST00000440860 PNMA6FA0A0J9YX94 578 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 TIAF1O95411 115 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 TGFB1P01137 390 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
LINC00354-202ENST00000440860 KCNA1Q09470 495 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 DSC3Q14574 896 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 AKAP4Q5JQC9 854 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 GLIS3Q8NEA6 775 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 FBLIM1Q8WUP2 373 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
LINC00354-202ENST00000440860 ZFYVE1Q9HBF4 777 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 PCMTD2Q9NV79 361 aa9.04□□□□□ -0.96
LINC00354-202ENST00000440860 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00354-202ENST00000440860 PRPF40BQ6NWY9 871 aaKnown RBP9.03□□□□□ -0.96
LINC00354-202ENST00000440860 DYMQ7RTS9 669 aa9.03□□□□□ -0.96
LINC00354-202ENST00000440860 SHKBP1Q8TBC3 707 aa9.03□□□□□ -0.96
LINC00354-202ENST00000440860 MFSD14AQ96MC6 490 aa9.03□□□□□ -0.96
LINC00354-202ENST00000440860 DBNDD2Q9BQY9 259 aa9.03□□□□□ -0.96
LINC00354-202ENST00000440860 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
LINC00354-202ENST00000440860 ZC3H12CQ9C0D7 883 aaKnown RBP9.03□□□□□ -0.96
LINC00354-202ENST00000440860 FAM95CA0A1B0GW59 222 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 WDR64B1ANS9 1081 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 TREHO43280 583 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 MAPK8P45983 427 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 FAAP100Q0VG06 881 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 PDE3AQ14432 1141 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 ZDHHC13Q8IUH4 622 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
LINC00354-202ENST00000440860 FBXL6Q8N531 539 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
LINC00354-202ENST00000440860 RPS26P11Q5JNZ5 115 aaPredicted RBP9.01□□□□□ -0.97
LINC00354-202ENST00000440860 HP1BP3Q5SSJ5 553 aaPredicted RBP9.01□□□□□ -0.97
LINC00354-202ENST00000440860 NXPE4Q6UWF7 544 aa9.01□□□□□ -0.97
LINC00354-202ENST00000440860 C2CD4AQ8NCU7 369 aaPredicted RBP9.01□□□□□ -0.97
LINC00354-202ENST00000440860 TRAIPQ9BWF2 469 aa9.01□□□□□ -0.97
LINC00354-202ENST00000440860 COBLO75128 1261 aa9□□□□□ -0.97
LINC00354-202ENST00000440860 MED26O95402 600 aa9□□□□□ -0.97
LINC00354-202ENST00000440860 ADH5P11766 374 aa9□□□□□ -0.97
LINC00354-202ENST00000440860 ENOX2Q16206 610 aaKnown RBP9□□□□□ -0.97
LINC00354-202ENST00000440860 PAOXQ6QHF9 649 aa9□□□□□ -0.97
LINC00354-202ENST00000440860 GPN3Q9UHW5 284 aaPredicted RBP9□□□□□ -0.97
LINC00354-202ENST00000440860 LIG1P18858 919 aa8.99□□□□□ -0.97
LINC00354-202ENST00000440860 AP3B2Q13367 1082 aa8.99□□□□□ -0.97
LINC00354-202ENST00000440860 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
LINC00354-202ENST00000440860 AP4E1Q9UPM8 1137 aa8.99□□□□□ -0.97
LINC00354-202ENST00000440860 ACTL7BQ9Y614 415 aa8.99□□□□□ -0.97
LINC00354-202ENST00000440860 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
LINC00354-202ENST00000440860 AOC2O75106 756 aa8.98□□□□□ -0.97
LINC00354-202ENST00000440860 RAB6AP20340 208 aa8.98□□□□□ -0.97
LINC00354-202ENST00000440860 ASPAP45381 313 aa8.98□□□□□ -0.97
LINC00354-202ENST00000440860 GIMAP7Q8NHV1 300 aa8.98□□□□□ -0.97
LINC00354-202ENST00000440860 YIPF2Q9BWQ6 316 aa8.98□□□□□ -0.97
LINC00354-202ENST00000440860 NFICP08651 508 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 GRIK1P39086 918 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 PPP2R3AQ06190 1150 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 SHISA5Q8N114 240 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
LINC00354-202ENST00000440860 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 LGR6Q9HBX8 967 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 TMEM39AQ9NV64 488 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 WWC3Q9ULE0 1092 aa8.97□□□□□ -0.97
LINC00354-202ENST00000440860 F13BP05160 661 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 CD97P48960 835 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 AEBP1Q8IUX7 1158 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 KCNB2Q92953 911 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 TBC1D32Q96NH3 1257 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 ASB16Q96NS5 453 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 WDR18Q9BV38 432 aa8.96□□□□□ -0.98
LINC00354-202ENST00000440860 CCDC86Q9H6F5 360 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms