RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LOC100289279A0A1B0GTE1 492 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 SOWAHDA6NJG2 315 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 TM4SF5O14894 197 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 POLR3DP05423 398 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 RXRBP28702 533 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 PREPP48147 710 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 USP11P51784 963 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 RPS26P11Q5JNZ5 115 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 EXOSC6Q5RKV6 272 aaKnown RBP5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 PAOXQ6QHF9 649 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 ARMC10Q8N2F6 343 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 TMPRSS13Q9BYE2 586 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 C7orf69Q9H7B7 122 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 NLRP2Q9NX02 1062 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 DCTN4Q9UJW0 460 aa5.58□□□□□ -1.52
HMGB3P11-201ENST00000440127 SCRIBQ14160 1630 aa5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 EIF1AYO14602 144 aaKnown RBP5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 B3GALT4O96024 378 aa5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 XRCC5P13010 732 aaKnown RBP5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 PRPF40BQ6NWY9 871 aaKnown RBP5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 ADAMTSL4Q6UY14 1074 aa5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 METTL22Q9BUU2 404 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P11-201ENST00000440127 HYAL3O43820 417 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 ITPKAP23677 461 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 MAP4P27816 1152 aaKnown RBP5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 PPP2R3AQ06190 1150 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 KCNA1Q09470 495 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 POU4F3Q15319 338 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 ZSCAN29Q8IWY8 852 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 CCDC74AQ96AQ1 378 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 CSRNP1Q96S65 589 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 TCF12Q99081 682 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 NPHS2Q9NP85 383 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 RAD18Q9NS91 495 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 ATG3Q9NT62 314 aa5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P11-201ENST00000440127 TIAF1O95411 115 aa5.55□□□□□ -1.52
HMGB3P11-201ENST00000440127 ORC1Q13415 861 aa5.55□□□□□ -1.52
HMGB3P11-201ENST00000440127 MAP7Q14244 749 aa5.55□□□□□ -1.52
HMGB3P11-201ENST00000440127 NIF3L1Q9GZT8 377 aa5.55□□□□□ -1.52
HMGB3P11-201ENST00000440127 ZNF576Q9H609 170 aa5.55□□□□□ -1.52
HMGB3P11-201ENST00000440127 SYNGAP1Q96PV0 1343 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 FAM95CA0A1B0GW59 222 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 HMX2A2RU54 273 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 BTBD11A6QL63 1104 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 METTL12A8MUP2 240 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 GPR182O15218 404 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 MAOBP27338 520 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 MAPK1P28482 360 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 GRIA4P48058 902 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 CD97P48960 835 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 CYP27A1Q02318 531 aa5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 SOX4Q06945 474 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P11-201ENST00000440127 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 TMEM238LA0A1B0GVL6 79 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 KIAA1324LA8MWY0 1029 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 ADH5P11766 374 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 SSTR4P31391 388 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 FGD1P98174 961 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 ATP2B2Q01814 1243 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 PDE3AQ14432 1141 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 ECM1Q16610 540 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 ZDHHC13Q8IUH4 622 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 FBF1Q8TES7 1133 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 OSBPL1AQ9BXW6 950 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 SRCIN1Q9C0H9 1055 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 LEMD3Q9Y2U8 911 aa5.53□□□□□ -1.52
HMGB3P11-201ENST00000440127 RSF1Q96T23 1441 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 PDIA4P13667 645 aaKnown RBP5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 PLCB3Q01970 1234 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 SPRED3Q2MJR0 410 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 SGO2Q562F6 1265 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 USPL1Q5W0Q7 1092 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 SHKBP1Q8TBC3 707 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 NRSN2Q9GZP1 204 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 ABCB6Q9NP58 842 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 PIM2Q9P1W9 311 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 AP4E1Q9UPM8 1137 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 SAMM50Q9Y512 469 aa5.52□□□□□ -1.53
HMGB3P11-201ENST00000440127 RB1CC1Q8TDY2 1594 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 WDR64B1ANS9 1081 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 TGFB1P01137 390 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 SLFN14P0C7P3 912 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 NFKBIBQ15653 356 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 ZNF423Q2M1K9 1284 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 AKAP4Q5JQC9 854 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 HGSNATQ68CP4 663 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 TMC7Q7Z402 723 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 C2CD4AQ8NCU7 369 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 PIDD1Q9HB75 910 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 KRT82Q9NSB4 513 aa5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 GPN3Q9UHW5 284 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 ANGEL1Q9UNK9 670 aaKnown RBP5.51□□□□□ -1.53
HMGB3P11-201ENST00000440127 GIPC1O14908 333 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 RANGAP1P46060 587 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 GRM2Q14416 872 aa5.5□□□□□ -1.53
HMGB3P11-201ENST00000440127 DUSP27Q5VZP5 1158 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms