RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 M0R2C6 588 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 SPTLC2O15270 562 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 TIMM10P62072 90 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 TERF2Q15554 542 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 TMC6Q7Z403 805 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 C8orf76Q96K31 380 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 C4BP0C0L5 1744 aa17.71■□□□□ 0.43
CDC42EP4-202ENST00000439510 SMC2O95347 1197 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 SF3A1Q15459 793 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 TAF3Q5VWG9 929 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 IFNL2Q8IZJ0 200 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 H2AFXP16104 143 aaPredicted RBP17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 TPM4P67936 248 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
CDC42EP4-202ENST00000439510 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 ZNF202O95125 648 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 IKBKBO14920 756 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 OTUD7BQ6GQQ9 843 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 ZNF446Q9NWS9 450 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 HPS5Q9UPZ3 1129 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 FOXP2O15409 715 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 CMA1P23946 247 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 GPHNQ9NQX3 736 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 KAT6BQ8WYB5 2073 aa17.69■□□□□ 0.42
CDC42EP4-202ENST00000439510 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
CDC42EP4-202ENST00000439510 PARP4Q9UKK3 1724 aaKnown RBP17.68■□□□□ 0.42
CDC42EP4-202ENST00000439510 EYA2O00167 538 aa17.68■□□□□ 0.42
CDC42EP4-202ENST00000439510 NRDCO43847 1150 aa17.68■□□□□ 0.42
CDC42EP4-202ENST00000439510 CIAO1O76071 339 aa17.68■□□□□ 0.42
CDC42EP4-202ENST00000439510 MB21D2Q8IYB1 491 aaPredicted RBP17.68■□□□□ 0.42
CDC42EP4-202ENST00000439510 HSPA1LP34931 641 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 FAM193AP78312 1265 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 SYT10Q6XYQ8 523 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 TIGD1Q96MW7 591 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 ORC3Q9UBD5 711 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 MYH7P12883 1935 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 A0A1B0GUL7 405 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 PFKFB1P16118 471 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 HSD3B7Q9H2F3 369 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
CDC42EP4-202ENST00000439510 KIF23Q02241 960 aaPredicted RBP17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 IMMTQ16891 758 aaKnown RBP17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 GOLGA8BA8MQT2 603 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 BIN1O00499 593 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 CCP110O43303 1012 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 PRC1O43663 620 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 SYNE3Q6ZMZ3 975 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
CDC42EP4-202ENST00000439510 CYP27B1O15528 508 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 FANCCQ00597 558 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 ERCC6LQ2NKX8 1250 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 TUBE1Q9UJT0 475 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 MROH7-TTC4A0A0A0MT08 1334 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 PLCH1Q4KWH8 1693 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 ZFYP08048 801 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 ANTXR2P58335 489 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 SLC39A14Q15043 492 aa17.65■□□□□ 0.42
CDC42EP4-202ENST00000439510 NBPF26B4DH59 902 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 BMS1Q14692 1282 aaKnown RBP17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 NBPF14Q5TI25 921 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 NBPF10Q6P3W6 841 aaKnown RBP17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 CREBRFQ8IUR6 639 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 NBPF15Q8N660 670 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 LRRN4CLQ8ND94 238 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 UBR2Q8IWV8 1755 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 FGAP02671 866 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 HPSEQ9Y251 543 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 ECM29Q5VYK3 1845 aa17.64■□□□□ 0.41
CDC42EP4-202ENST00000439510 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
CDC42EP4-202ENST00000439510 GJB4Q9NTQ9 266 aa17.63■□□□□ 0.41
CDC42EP4-202ENST00000439510 FAM237AA0A1B0GTK4 181 aa17.63■□□□□ 0.41
CDC42EP4-202ENST00000439510 CPLX1O14810 134 aa17.63■□□□□ 0.41
CDC42EP4-202ENST00000439510 HAND2P61296 217 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms