RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ZGPATQ8N5A5 531 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ZSWIM6Q9HCJ5 1215 aa16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 SNED1Q8TER0 1413 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 LAMA4Q16363 1823 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CYP21A2P08686 494 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 PSMA5P28066 241 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 POLD1P28340 1107 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 MCM2P49736 904 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TTC14Q96N46 770 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 EYA3Q99504 573 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CTNNA3Q9UI47 895 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TAF6LQ9Y6J9 622 aa16.2■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CASTP20810 708 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CC2D2BQ6DHV5 1058 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 C7orf43Q8WVR3 580 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 NSUN4Q96CB9 384 aaKnown RBP16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 COA1Q9GZY4 146 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ARMT1Q9H993 441 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 JAG2Q9Y219 1238 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
HLA-DPA1-243ENST00000437811 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 PRDX5P30044 214 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 MECOMQ03112 1051 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ALX1Q15699 326 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ADGRA1Q86SQ6 560 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 LCORLQ8N3X6 602 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ZC3H12CQ9C0D7 883 aaKnown RBP16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 FAM205AQ6ZU69 1335 aa16.18■□□□□ 0.18
HLA-DPA1-243ENST00000437811 MAGEB6P1A0A0J9YX57 407 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 FGAP02671 866 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 DPEP1P16444 411 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 GNAT2P19087 354 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TTLL5Q6EMB2 1281 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 BLOC1S2Q6QNY1 142 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 RUFY3Q7L099 469 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 MIGA1Q8NAN2 632 aa16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
HLA-DPA1-243ENST00000437811 A0A0G2JLW4 131 aa16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 PATL2C9JE40 543 aaKnown RBP16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CPA1P15085 419 aa16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 IMMTQ16891 758 aaKnown RBP16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 STOX1Q6ZVD7 989 aa16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 DZIP1Q86YF9 867 aaKnown RBP16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TTLL6Q8N841 843 aa16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 KCNA3P22001 575 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 AK2P54819 239 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TGFB2P61812 414 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 GRIPAP1Q4V328 841 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 EPB41L4AQ9HCS5 686 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 PDRG1Q9NUG6 133 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 CHD4Q14839 1912 aa16.15■□□□□ 0.18
HLA-DPA1-243ENST00000437811 GSG1L2A8MUP6 293 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 APPP05067 770 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 IFNL3Q8IZI9 196 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SLKQ9H2G2 1235 aaPredicted RBP16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PSDA5PKW4 1024 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 E7EWF7 191 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 PRKAB2O43741 272 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DYNLL1P63167 89 aaKnown RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 GSTO1P78417 241 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 COL9A3Q14050 684 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 GRIK5Q16478 980 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CCDC93Q567U6 631 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 NAPBQ9H115 298 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 ZNF213O14771 459 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 C21orf2O43822 256 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 LDHCP07864 332 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 HSP90AA1P07900 732 aaKnown RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 HAND2P61296 217 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 GTF2IP78347 998 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 CUL4AQ13619 759 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
HLA-DPA1-243ENST00000437811 G3V3G9 751 aa16.12■□□□□ 0.17
HLA-DPA1-243ENST00000437811 DDIT3P35638 169 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms