RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 PARP2Q9UGN5 583 aa9.33□□□□□ -0.92
HDAC9-213ENST00000433709 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 GNA15P30679 374 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 C19orf57Q0VDD7 668 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 IGF2-ASQ6U949 168 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 AKAP2Q9Y2D5 859 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 SYNJ2O15056 1496 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 GAPVD1Q14C86 1478 aa9.32□□□□□ -0.92
HDAC9-213ENST00000433709 GIPC1O14908 333 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 ADAM11O75078 769 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 FGD1P98174 961 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 PTPN12Q05209 780 aaKnown RBP9.31□□□□□ -0.92
HDAC9-213ENST00000433709 FAAP100Q0VG06 881 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
HDAC9-213ENST00000433709 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 GIPC2Q8TF65 315 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-213ENST00000433709 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 C12orf49Q9H741 205 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 USP21Q9UK80 565 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
HDAC9-213ENST00000433709 SNAPC4Q5SXM2 1469 aa9.3□□□□□ -0.92
HDAC9-213ENST00000433709 ARL4DP49703 201 aa9.3□□□□□ -0.92
HDAC9-213ENST00000433709 ZNF157P51786 506 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-213ENST00000433709 NLRP12P59046 1061 aa9.3□□□□□ -0.92
HDAC9-213ENST00000433709 FOXD4L4Q8WXT5 416 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-213ENST00000433709 FRMD6Q96NE9 622 aa9.3□□□□□ -0.92
HDAC9-213ENST00000433709 C9orf172C9J069 976 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 WISP1O95388 367 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 B3GALT4O96024 378 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 GSTM4Q03013 218 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 AK5Q9Y6K8 562 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 RIMBP3CA6NJZ7 1639 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 RIMBP3BA6NNM3 1639 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 RIMBP3Q9UFD9 1639 aa9.29□□□□□ -0.92
HDAC9-213ENST00000433709 CHD1O14646 1710 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 USP17L7P0C7H9 530 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 XRCC5P13010 732 aaKnown RBP9.28□□□□□ -0.92
HDAC9-213ENST00000433709 EIF4BP23588 611 aaKnown RBP9.28□□□□□ -0.92
HDAC9-213ENST00000433709 GSTT1P30711 240 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 DAB2P98082 770 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 XPCQ01831 940 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-213ENST00000433709 PSMD2Q13200 908 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 RPS26P11Q5JNZ5 115 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-213ENST00000433709 DCAF11Q8TEB1 546 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
HDAC9-213ENST00000433709 SOX17Q9H6I2 414 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-213ENST00000433709 TOP2BQ02880 1626 aa9.27□□□□□ -0.92
HDAC9-213ENST00000433709 ALX3O95076 343 aa9.27□□□□□ -0.93
HDAC9-213ENST00000433709 ADGRE1Q14246 886 aa9.27□□□□□ -0.93
HDAC9-213ENST00000433709 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
HDAC9-213ENST00000433709 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
HDAC9-213ENST00000433709 TMC4Q7Z404 712 aa9.27□□□□□ -0.93
HDAC9-213ENST00000433709 MRPL18Q9H0U6 180 aaKnown RBP9.27□□□□□ -0.93
HDAC9-213ENST00000433709 FAM8A1Q9UBU6 413 aa9.27□□□□□ -0.93
HDAC9-213ENST00000433709 NRG1Q02297 640 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-213ENST00000433709 DUOXA2Q1HG44 320 aa9.26□□□□□ -0.93
HDAC9-213ENST00000433709 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
HDAC9-213ENST00000433709 AGGF1Q8N302 714 aaeCLIP9.26□□□□□ -0.93
HDAC9-213ENST00000433709 BIVM-ERCC5R4GMW8 1640 aa9.26□□□□□ -0.93
HDAC9-213ENST00000433709 F8W735 103 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-213ENST00000433709 FBXO24O75426 580 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 ZNF326Q5BKZ1 582 aaKnown RBP9.25□□□□□ -0.93
HDAC9-213ENST00000433709 TPTE2Q6XPS3 522 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 ACAD11Q709F0 780 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 RGS22Q8NE09 1264 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 WFDC12Q8WWY7 111 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 TRIM56Q9BRZ2 755 aaKnown RBP9.25□□□□□ -0.93
HDAC9-213ENST00000433709 USP26Q9BXU7 913 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 ZFYVE1Q9HBF4 777 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 PODXL2Q9NZ53 605 aa9.25□□□□□ -0.93
HDAC9-213ENST00000433709 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-213ENST00000433709 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
HDAC9-213ENST00000433709 ZNF16P17020 682 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-213ENST00000433709 NOS3P29474 1203 aa9.24□□□□□ -0.93
HDAC9-213ENST00000433709 IREB2P48200 963 aaKnown RBP9.24□□□□□ -0.93
HDAC9-213ENST00000433709 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.24□□□□□ -0.93
HDAC9-213ENST00000433709 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
HDAC9-213ENST00000433709 NRSN2Q9GZP1 204 aa9.24□□□□□ -0.93
HDAC9-213ENST00000433709 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
HDAC9-213ENST00000433709 CCDC9Q9Y3X0 531 aaKnown RBP9.24□□□□□ -0.93
HDAC9-213ENST00000433709 FHAD1B1AJZ9 1412 aa9.23□□□□□ -0.93
HDAC9-213ENST00000433709 PBRM1Q86U86 1689 aa9.23□□□□□ -0.93
HDAC9-213ENST00000433709 ERICH3Q5RHP9 1530 aa9.23□□□□□ -0.93
HDAC9-213ENST00000433709 DLGAP3O95886 979 aa9.23□□□□□ -0.93
HDAC9-213ENST00000433709 MAOBP27338 520 aa9.23□□□□□ -0.93
HDAC9-213ENST00000433709 TMEM39AQ9NV64 488 aa9.23□□□□□ -0.93
HDAC9-213ENST00000433709 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
HDAC9-213ENST00000433709 LOC100289279A0A1B0GTE1 492 aa9.22□□□□□ -0.93
HDAC9-213ENST00000433709 ECEL1O95672 775 aa9.22□□□□□ -0.93
HDAC9-213ENST00000433709 CTSBP07858 339 aa9.22□□□□□ -0.93
HDAC9-213ENST00000433709 GATA4P43694 442 aa9.22□□□□□ -0.93
HDAC9-213ENST00000433709 TXNRD3Q86VQ6 643 aa9.22□□□□□ -0.93
HDAC9-213ENST00000433709 DDX54Q8TDD1 881 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms