RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 IGHMBP2P38935 993 aaKnown RBP15.15■□□□□ 0.02
DDX56-204ENST00000431640 SCARF1Q14162 830 aa15.15■□□□□ 0.02
DDX56-204ENST00000431640 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
DDX56-204ENST00000431640 ZNF274Q96GC6 653 aaPredicted RBP15.15■□□□□ 0.02
DDX56-204ENST00000431640 BRIP1Q9BX63 1249 aa15.15■□□□□ 0.02
DDX56-204ENST00000431640 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
DDX56-204ENST00000431640 ADD2P35612 726 aa15.14■□□□□ 0.01
DDX56-204ENST00000431640 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
DDX56-204ENST00000431640 MCAMP43121 646 aa15.14■□□□□ 0.01
DDX56-204ENST00000431640 CCDC173Q0VFZ6 552 aa15.14■□□□□ 0.01
DDX56-204ENST00000431640 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
DDX56-204ENST00000431640 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
DDX56-204ENST00000431640 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
DDX56-204ENST00000431640 STOX1Q6ZVD7 989 aa15.14■□□□□ 0.01
DDX56-204ENST00000431640 BRF1Q92994 677 aa15.14■□□□□ 0.01
DDX56-204ENST00000431640 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
DDX56-204ENST00000431640 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
DDX56-204ENST00000431640 KRT85P78386 507 aa15.13■□□□□ 0.01
DDX56-204ENST00000431640 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
DDX56-204ENST00000431640 STK3Q13188 491 aa15.13■□□□□ 0.01
DDX56-204ENST00000431640 SLFNL1Q499Z3 407 aa15.13■□□□□ 0.01
DDX56-204ENST00000431640 SRCAPQ6ZRS2 3230 aa15.13■□□□□ 0.01
DDX56-204ENST00000431640 ZNF213O14771 459 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 GADD45BO75293 160 aaPredicted RBP15.12■□□□□ 0.01
DDX56-204ENST00000431640 FGAP02671 866 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 SRGNP10124 158 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 CHRNA5P30532 468 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 COL9A3Q14050 684 aaPredicted RBP15.12■□□□□ 0.01
DDX56-204ENST00000431640 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
DDX56-204ENST00000431640 GDPD2Q9HCC8 539 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 MYH7P12883 1935 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 WDR19Q8NEZ3 1342 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 DUOX1Q9NRD9 1551 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 SLX4Q8IY92 1834 aa15.12■□□□□ 0.01
DDX56-204ENST00000431640 TCHHQ07283 1943 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 SYCE3A1L190 88 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 WTIPA6NIX2 430 aaPredicted RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 GPAA1O43292 621 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 EVCP57679 992 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 DNM1Q05193 864 aaKnown RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 CCDC183Q5T5S1 534 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 TRIM44Q96DX7 344 aaPredicted RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 PPP1R9BQ96SB3 815 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 CDC5LQ99459 802 aaKnown RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 SCAND2PQ9GZW5 306 aaPredicted RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 LAMA4Q16363 1823 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 SNAP23O00161 211 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 MCM5P33992 734 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 GRAPQ13588 217 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 NCOA7Q8NI08 942 aa15.11■□□□□ 0.01
DDX56-204ENST00000431640 GRAPLQ8TC17 118 aaPredicted RBP15.11■□□□□ 0.01
DDX56-204ENST00000431640 ELP1O95163 1332 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 H3BQV1 296 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 SOCS7O14512 581 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 FIBPO43427 364 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 PHKA1P46020 1223 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 SCRN1Q12765 414 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 IFFO2Q5TF58 517 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 RBSNQ9H1K0 784 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 TSPY26PQ9H489 355 aa15.1■□□□□ 0.01
DDX56-204ENST00000431640 DHX16O60231 1041 aaKnown RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 TRDNQ13061 729 aa15.09■□□□□ 0.01
DDX56-204ENST00000431640 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
DDX56-204ENST00000431640 NAA16Q6N069 864 aaPredicted RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 OLFM4Q6UX06 510 aa15.09■□□□□ 0.01
DDX56-204ENST00000431640 RALYLQ86SE5 291 aaKnown RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
DDX56-204ENST00000431640 ANKRD18AQ8IVF6 992 aa15.09■□□□□ 0.01
DDX56-204ENST00000431640 HELBQ8NG08 1087 aaPredicted RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 PIH1D3Q9NQM4 214 aaKnown RBP15.09■□□□□ 0.01
DDX56-204ENST00000431640 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
DDX56-204ENST00000431640 KCNA3P22001 575 aa15.08■□□□□ 0
DDX56-204ENST00000431640 PDIA3P30101 505 aaKnown RBP15.08■□□□□ 0
DDX56-204ENST00000431640 PDE6BP35913 854 aa15.08■□□□□ 0
DDX56-204ENST00000431640 RPS8P62241 208 aaKnown RBP15.08■□□□□ 0
DDX56-204ENST00000431640 APOBRQ0VD83 1088 aa15.08■□□□□ 0
DDX56-204ENST00000431640 ALX1Q15699 326 aa15.08■□□□□ 0
DDX56-204ENST00000431640 PI16Q6UXB8 463 aa15.08■□□□□ 0
DDX56-204ENST00000431640 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0
DDX56-204ENST00000431640 LRRC2Q9BYS8 371 aa15.08■□□□□ 0
DDX56-204ENST00000431640 BSDC1Q9NW68 430 aaPredicted RBP15.08■□□□□ 0
DDX56-204ENST00000431640 CFAP45Q9UL16 551 aa15.08■□□□□ 0
DDX56-204ENST00000431640 FOXP2O15409 715 aa15.07■□□□□ 0
DDX56-204ENST00000431640 NPR1P16066 1061 aa15.07■□□□□ 0
DDX56-204ENST00000431640 PDE6AP16499 860 aa15.07■□□□□ 0
DDX56-204ENST00000431640 CHRNDQ07001 517 aa15.07■□□□□ 0
DDX56-204ENST00000431640 ATL3Q6DD88 541 aa15.07■□□□□ 0
DDX56-204ENST00000431640 CRAMP1Q96RY5 1269 aa15.07■□□□□ 0
DDX56-204ENST00000431640 MINPP1Q9UNW1 487 aa15.07■□□□□ 0
DDX56-204ENST00000431640 ZNF532Q9HCE3 1301 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms