RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SPATA32Q96LK8 384 aa16.41■□□□□ 0.22
HOXC4-202ENST00000430889 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
HOXC4-202ENST00000430889 TFIP11Q9UBB9 837 aaKnown RBP16.41■□□□□ 0.22
HOXC4-202ENST00000430889 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
HOXC4-202ENST00000430889 H3BQV1 296 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 PTF1AQ7RTS3 328 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 RGS22Q8NE09 1264 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 DENND2AQ9ULE3 1009 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 COL1A1P02452 1464 aaPredicted RBP16.4■□□□□ 0.22
HOXC4-202ENST00000430889 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 BCAMP50895 628 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 CYB5R4Q7L1T6 521 aa16.4■□□□□ 0.22
HOXC4-202ENST00000430889 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
HOXC4-202ENST00000430889 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 PATL2C9JE40 543 aaKnown RBP16.39■□□□□ 0.21
HOXC4-202ENST00000430889 SH2B2O14492 632 aaPredicted RBP16.39■□□□□ 0.21
HOXC4-202ENST00000430889 MAP3K12Q12852 859 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 ATL3Q6DD88 541 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 RALYLQ86SE5 291 aaKnown RBP16.39■□□□□ 0.21
HOXC4-202ENST00000430889 ZSCAN30Q86W11 494 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 RCOR1Q9UKL0 485 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 MYH13Q9UKX3 1938 aa16.39■□□□□ 0.21
HOXC4-202ENST00000430889 TACC3Q9Y6A5 838 aa16.38■□□□□ 0.21
HOXC4-202ENST00000430889 NEDD4P46934 1319 aa16.38■□□□□ 0.21
HOXC4-202ENST00000430889 GOLGA8BA8MQT2 603 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 GSG1L2A8MUP6 293 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 DDX19AQ9NUU7 478 aaKnown RBP16.37■□□□□ 0.21
HOXC4-202ENST00000430889 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
HOXC4-202ENST00000430889 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.37■□□□□ 0.21
HOXC4-202ENST00000430889 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 CFAP45Q9UL16 551 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 NID2Q14112 1375 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 MBD4O95243 580 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
HOXC4-202ENST00000430889 ANGEL1Q9UNK9 670 aaKnown RBP16.37■□□□□ 0.21
HOXC4-202ENST00000430889 KCNQ4P56696 695 aa16.36■□□□□ 0.21
HOXC4-202ENST00000430889 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
HOXC4-202ENST00000430889 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
HOXC4-202ENST00000430889 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
HOXC4-202ENST00000430889 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
HOXC4-202ENST00000430889 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
HOXC4-202ENST00000430889 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
HOXC4-202ENST00000430889 TNRC6CQ9HCJ0 1690 aaKnown RBP16.36■□□□□ 0.21
HOXC4-202ENST00000430889 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
HOXC4-202ENST00000430889 TMEM87BQ96K49 555 aa16.35■□□□□ 0.21
HOXC4-202ENST00000430889 USP28Q96RU2 1077 aa16.35■□□□□ 0.21
HOXC4-202ENST00000430889 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
HOXC4-202ENST00000430889 KIAA1551Q9HCM1 1747 aa16.35■□□□□ 0.21
HOXC4-202ENST00000430889 MAST2Q6P0Q8 1798 aa16.35■□□□□ 0.21
HOXC4-202ENST00000430889 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 ZBTB22O15209 634 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 GNAT2P19087 354 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 TRDNQ13061 729 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 TPRNQ4KMQ1 711 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 LCORLQ8N3X6 602 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
HOXC4-202ENST00000430889 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 SPATA31A6Q5VVP1 1343 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 B4E1Z4 1266 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 NR1I2O75469 434 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 APPP05067 770 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 FOSBP53539 338 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 SMIM5Q71RC9 77 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 STAG1Q8WVM7 1258 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 FTOQ9C0B1 505 aaKnown RBP eCLIP16.34■□□□□ 0.21
HOXC4-202ENST00000430889 SENP2Q9HC62 589 aa16.34■□□□□ 0.21
HOXC4-202ENST00000430889 ORC3Q9UBD5 711 aaPredicted RBP16.34■□□□□ 0.21
HOXC4-202ENST00000430889 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
HOXC4-202ENST00000430889 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
HOXC4-202ENST00000430889 PRKAB2O43741 272 aa16.33■□□□□ 0.2
HOXC4-202ENST00000430889 CCDC192P0DO97 292 aa16.33■□□□□ 0.2
HOXC4-202ENST00000430889 LIFRP42702 1097 aa16.33■□□□□ 0.2
HOXC4-202ENST00000430889 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
HOXC4-202ENST00000430889 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
HOXC4-202ENST00000430889 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.2
HOXC4-202ENST00000430889 NAPBQ9H115 298 aa16.33■□□□□ 0.2
HOXC4-202ENST00000430889 FAM217BQ9NTX9 383 aaPredicted RBP16.33■□□□□ 0.2
HOXC4-202ENST00000430889 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.2
HOXC4-202ENST00000430889 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
HOXC4-202ENST00000430889 PPFIA3O75145 1194 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 ADRA2BP18089 450 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 GUCY1B3Q02153 619 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 TYRO3Q06418 890 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 NTRK3Q16288 839 aa16.32■□□□□ 0.2
HOXC4-202ENST00000430889 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms