RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 KCNG4Q8TDN1 519 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 STRN4Q9NRL3 753 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 WDR19Q8NEZ3 1342 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 C4AP0C0L4 1744 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 C4BP0C0L5 1744 aa15.51■□□□□ 0.07
SNRNP200-202ENST00000429650 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 MYSM1Q5VVJ2 828 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 BRAPQ7Z569 592 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 SDF4Q9BRK5 362 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 CPLX1O14810 134 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 SF3A1Q15459 793 aaKnown RBP15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 AOPEPQ8N6M6 819 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.5■□□□□ 0.072e-7■■■□□ 15.4
SNRNP200-202ENST00000429650 GJB4Q9NTQ9 266 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 SOS2Q07890 1332 aaPredicted RBP15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 ABCA3Q99758 1704 aa15.5■□□□□ 0.07
SNRNP200-202ENST00000429650 NEMFO60524 1076 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 TNNT1P13805 278 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 ARID5BQ14865 1188 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 ZFP91Q96JP5 570 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 TEX13AQ9BXU3 409 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 NAT10Q9H0A0 1025 aaKnown RBP15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 NEDD4P46934 1319 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 CDHR2Q9BYE9 1310 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 KIF28PB7ZC32 967 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 SPTLC2O15270 562 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 ITGA6P23229 1130 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 ADD2P35612 726 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 LDHAL6AQ6ZMR3 332 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 GREM2Q9H772 168 aa15.49■□□□□ 0.07
SNRNP200-202ENST00000429650 RBM6P78332 1123 aaKnown RBP15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 TTLL11Q8NHH1 800 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 MYO5AQ9Y4I1 1855 aaKnown RBP15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 ATRNO75882 1429 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 KIF23Q02241 960 aaPredicted RBP15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 HLFQ16534 295 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 TPD52L1Q16890 204 aaPredicted RBP15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 PIGBQ92521 554 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 ANKRD7Q92527 254 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 KIAA1468Q9P260 1216 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 DENND2AQ9ULE3 1009 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 MYH3P11055 1940 aa15.48■□□□□ 0.07
SNRNP200-202ENST00000429650 STARD3NLO95772 234 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 GPTP24298 496 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 ZNF512BQ96KM6 892 aaPredicted RBP15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 EVA1CP58658 441 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 SLC9C2Q5TAH2 1124 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 ANO1Q5XXA6 986 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 SYNE3Q6ZMZ3 975 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 TBC1D10CQ8IV04 446 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 ZMYM6O95789 1325 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 CTSWP56202 376 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 TRDNQ13061 729 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 DPCR1Q3MIW9 517 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 FILIP1Q7Z7B0 1213 aa15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 ANGEL1Q9UNK9 670 aaKnown RBP15.47■□□□□ 0.07
SNRNP200-202ENST00000429650 ANKRD18BA2A2Z9 1011 aa15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 CCDC69A6NI79 296 aa15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 CCZ1BP86790 482 aa15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 CCZ1P86791 482 aaPredicted RBP15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 TTF1Q15361 905 aaPredicted RBP15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 AXDND1Q5T1B0 1012 aaPredicted RBP15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 CYB5R4Q7L1T6 521 aa15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 RGS22Q8NE09 1264 aa15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 PIH1D3Q9NQM4 214 aaKnown RBP15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 CNNM1Q9NRU3 951 aa15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.46■□□□□ 0.07
SNRNP200-202ENST00000429650 ZNF202O95125 648 aa15.46■□□□□ 0.06
SNRNP200-202ENST00000429650 SKILP12757 684 aa15.46■□□□□ 0.06
SNRNP200-202ENST00000429650 BPIFA3Q9BQP9 254 aa15.46■□□□□ 0.06
SNRNP200-202ENST00000429650 PAXBP1Q9Y5B6 917 aa15.46■□□□□ 0.06
SNRNP200-202ENST00000429650 ANKRD36CQ5JPF3 1778 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 USP27XA6NNY8 438 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 SH2B2O14492 632 aaPredicted RBP15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 UBE3CQ15386 1083 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 NBPF11Q86T75 865 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 ITGB4P16144 1822 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 IDH1O75874 414 aaKnown RBP15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 SLC3A2P08195 630 aaKnown RBP15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 CMA1P23946 247 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 METAP2P50579 478 aaKnown RBP eCLIP15.45■□□□□ 0.066e-7■■■□□ 15.1
SNRNP200-202ENST00000429650 ZRSR1Q15695 479 aaKnown RBP15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 IPO4Q8TEX9 1081 aaKnown RBP15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 AIFM3Q96NN9 605 aa15.45■□□□□ 0.06
SNRNP200-202ENST00000429650 IRS4O14654 1257 aaPredicted RBP15.44■□□□□ 0.06
SNRNP200-202ENST00000429650 PFKFB1P16118 471 aa15.44■□□□□ 0.06
SNRNP200-202ENST00000429650 ALG1Q9BT22 464 aa15.44■□□□□ 0.06
SNRNP200-202ENST00000429650 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
SNRNP200-202ENST00000429650 ZNF532Q9HCE3 1301 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms