RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 PDLIM2Q96JY6 352 aa19.06■□□□□ 0.64
MBD4-203ENST00000429544 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
MBD4-203ENST00000429544 GTF2E1P29083 439 aaPredicted RBP19.06■□□□□ 0.64
MBD4-203ENST00000429544 ARMT1Q9H993 441 aa19.06■□□□□ 0.64
MBD4-203ENST00000429544 SRP68Q9UHB9 627 aaKnown RBP19.06■□□□□ 0.64
MBD4-203ENST00000429544 IQSEC3Q9UPP2 1182 aaPredicted RBP19.06■□□□□ 0.64
MBD4-203ENST00000429544 WDR19Q8NEZ3 1342 aa19.06■□□□□ 0.64
MBD4-203ENST00000429544 GOLGA6L4A6NEF3 574 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 GUCY1B3Q02153 619 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 SF3B3Q15393 1217 aaKnown RBP19.05■□□□□ 0.64
MBD4-203ENST00000429544 CYB5R4Q7L1T6 521 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 NKX2-3Q8TAU0 364 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 EPB41L4AQ9HCS5 686 aaPredicted RBP19.05■□□□□ 0.64
MBD4-203ENST00000429544 HPS5Q9UPZ3 1129 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 C4BP0C0L5 1744 aa19.05■□□□□ 0.64
MBD4-203ENST00000429544 FDPSP14324 419 aaKnown RBP19.04■□□□□ 0.64
MBD4-203ENST00000429544 ALX1Q15699 326 aa19.04■□□□□ 0.64
MBD4-203ENST00000429544 NEDD4P46934 1319 aa19.04■□□□□ 0.64
MBD4-203ENST00000429544 PATL2C9JE40 543 aaKnown RBP19.03■□□□□ 0.64
MBD4-203ENST00000429544 GNPATO15228 680 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
MBD4-203ENST00000429544 B4E1Z4 1266 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 RC3H1Q5TC82 1133 aaKnown RBP19.03■□□□□ 0.64
MBD4-203ENST00000429544 IFNL3Q8IZI9 196 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 NAPBQ9H115 298 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 LRP2BPQ9P2M1 347 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 ZMYM6O95789 1325 aa19.03■□□□□ 0.64
MBD4-203ENST00000429544 GYG1P46976 350 aa19.02■□□□□ 0.64
MBD4-203ENST00000429544 PGBD1Q96JS3 809 aa19.02■□□□□ 0.64
MBD4-203ENST00000429544 FUCA2Q9BTY2 467 aa19.02■□□□□ 0.64
MBD4-203ENST00000429544 CCNL1Q9UK58 526 aaPredicted RBP19.02■□□□□ 0.64
MBD4-203ENST00000429544 CEBPZQ03701 1054 aaKnown RBP19.02■□□□□ 0.64
MBD4-203ENST00000429544 LCORLQ8N3X6 602 aa19.02■□□□□ 0.64
MBD4-203ENST00000429544 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
MBD4-203ENST00000429544 CFAP45Q9UL16 551 aa19.02■□□□□ 0.64
MBD4-203ENST00000429544 ANGEL1Q9UNK9 670 aaKnown RBP19.02■□□□□ 0.64
MBD4-203ENST00000429544 TAF1LQ8IZX4 1826 aa19.02■□□□□ 0.63
MBD4-203ENST00000429544 PRKAB2O43741 272 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 DHX16O60231 1041 aaKnown RBP19.01■□□□□ 0.63
MBD4-203ENST00000429544 ADD1P35611 737 aaKnown RBP19.01■□□□□ 0.63
MBD4-203ENST00000429544 CTDSPL2Q05D32 466 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 CELF1Q92879 486 aaKnown RBP19.01■□□□□ 0.63
MBD4-203ENST00000429544 NUP62CLQ9H1M0 184 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 TIAM2Q8IVF5 1701 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 GSG1L2A8MUP6 293 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 SH2B2O14492 632 aaPredicted RBP19.01■□□□□ 0.63
MBD4-203ENST00000429544 RGL2O15211 777 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 BICD2Q8TD16 824 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 FTOQ9C0B1 505 aaKnown RBP eCLIP19.01■□□□□ 0.63
MBD4-203ENST00000429544 DACT1Q9NYF0 836 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 ZNF804BA4D1E1 1349 aa19.01■□□□□ 0.63
MBD4-203ENST00000429544 COL1A1P02452 1464 aaPredicted RBP19.01■□□□□ 0.63
MBD4-203ENST00000429544 CPLX1O14810 134 aa19■□□□□ 0.63
MBD4-203ENST00000429544 ZPR1O75312 459 aa19■□□□□ 0.63
MBD4-203ENST00000429544 CLCN1P35523 988 aa19■□□□□ 0.63
MBD4-203ENST00000429544 UBE4AQ14139 1066 aa19■□□□□ 0.63
MBD4-203ENST00000429544 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
MBD4-203ENST00000429544 NBPF5PQ86XG9 351 aaPredicted RBP19■□□□□ 0.63
MBD4-203ENST00000429544 MIGA1Q8NAN2 632 aa19■□□□□ 0.63
MBD4-203ENST00000429544 NYXQ9GZU5 481 aa19■□□□□ 0.63
MBD4-203ENST00000429544 ORC3Q9UBD5 711 aaPredicted RBP19■□□□□ 0.63
MBD4-203ENST00000429544 MINPP1Q9UNW1 487 aa19■□□□□ 0.63
MBD4-203ENST00000429544 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
MBD4-203ENST00000429544 CAMK4Q16566 473 aa19■□□□□ 0.63
MBD4-203ENST00000429544 SLC4A4Q9Y6R1 1079 aa19■□□□□ 0.63
MBD4-203ENST00000429544 OTUD7BQ6GQQ9 843 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 AMIGO3Q86WK7 504 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 CCDC24Q8N4L8 307 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 GNL3LQ9NVN8 582 aaKnown RBP18.99■□□□□ 0.63
MBD4-203ENST00000429544 ABCF2Q9UG63 623 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 LY75O60449 1722 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 PNPLA7Q6ZV29 1317 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 CYP7A1P22680 504 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 TDO2P48775 406 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 MAP3K11Q16584 847 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 UVSSAQ2YD98 709 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 ILDR1Q86SU0 546 aaPredicted RBP18.99■□□□□ 0.63
MBD4-203ENST00000429544 C8orf76Q96K31 380 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 RTCBQ9Y3I0 505 aaKnown RBP18.99■□□□□ 0.63
MBD4-203ENST00000429544 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
MBD4-203ENST00000429544 ZNF396Q96N95 335 aaPredicted RBP18.98■□□□□ 0.63
MBD4-203ENST00000429544 USP28Q96RU2 1077 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 GNAT2P19087 354 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 RXRAP19793 462 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 KLHL34Q8N239 644 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 TMEM87BQ96K49 555 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 DDX19AQ9NUU7 478 aaKnown RBP18.98■□□□□ 0.63
MBD4-203ENST00000429544 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 MYH13Q9UKX3 1938 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 ECM29Q5VYK3 1845 aa18.98■□□□□ 0.63
MBD4-203ENST00000429544 NR1I2O75469 434 aa18.97■□□□□ 0.63
MBD4-203ENST00000429544 METAP2P50579 478 aaKnown RBP eCLIP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms