RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 TRIM75PA6NK02 468 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 MBD4O95243 580 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 RNF169Q8NCN4 708 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 KIAA1524Q8TCG1 905 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 NOC2LQ9Y3T9 749 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 KAT6BQ8WYB5 2073 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 SLC1A4P43007 532 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 SYKP43405 635 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 CCDC50Q8IVM0 306 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 PA2G4Q9UQ80 394 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-202ENST00000427926 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 SYCE3A1L190 88 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 CLGNO14967 610 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 CBX1P83916 185 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 TFCP2Q12800 502 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 GSTA5Q7RTV2 222 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 CCDC14Q49A88 953 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 ASXL1Q8IXJ9 1541 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 GOLGA6L9A6NEM1 432 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 STX1AQ16623 288 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 SKAP1Q86WV1 359 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 FAM193BQ96PV7 902 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 STX10O60499 249 aa11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-202ENST00000427926 PLBD2Q8NHP8 589 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 EYA1Q99502 592 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 MCM7P33993 719 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 MEIS3Q99687 375 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 GLT8D2Q9H1C3 349 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 TXNDC16Q9P2K2 825 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 NPATQ14207 1427 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 GLG1Q92896 1179 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 TRIM37O94972 964 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 FRMD4BQ9Y2L6 1034 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 NEO1Q92859 1461 aa11.23□□□□□ -0.61
CLTCL1-202ENST00000427926 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 JADE2Q9NQC1 790 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 TEKT1Q969V4 418 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 EXOC7Q9UPT5 735 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 FAM169AQ9Y6X4 670 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 DDX39AO00148 427 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 URI1O94763 535 aaPredicted RBP11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 RPL13P26373 211 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 GABPAQ06546 454 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 TMCO3Q6UWJ1 677 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 DTHD1Q6ZMT9 781 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 Q6ZUG5 572 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 GTF2IP78347 998 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 KRT27Q7Z3Y8 459 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 EHBP1Q8NDI1 1231 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 MLXIPQ9HAP2 919 aa11.22□□□□□ -0.61
CLTCL1-202ENST00000427926 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 DAPK3O43293 454 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 KRT5P13647 590 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 ARID5AQ03989 594 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 SPAG1Q07617 926 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 CFAP58Q5T655 872 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 CTAGE1Q96RT6 745 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 TTF2Q9UNY4 1162 aaKnown RBP11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 ARHGEF12Q9NZN5 1544 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 ATP8B2P98198 1209 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 LETM2Q2VYF4 491 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 KIFC2Q96AC6 838 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 HAUS2Q9NVX0 235 aa11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 AATFQ9NY61 560 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLTCL1-202ENST00000427926 A0A1W2PRG0 241 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 ARHGEF35A5YM69 484 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 TMC6Q7Z403 805 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 DHX58Q96C10 678 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 TMX1Q9H3N1 280 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 CCNA1P78396 465 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 RASA3Q14644 834 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 USH1GQ495M9 461 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 TTC22Q5TAA0 569 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 DNAJC10Q8IXB1 793 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC65Q8IXS2 484 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC63Q8NA47 563 aa11.21□□□□□ -0.62
CLTCL1-202ENST00000427926 NOX5Q96PH1 765 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms