RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 AGTPBP1Q9UPW5 1226 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 PARP1P09874 1014 aaKnown RBP6.46□□□□□ -1.38
HERC4-206ENST00000427635 KRT5P13647 590 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 RTN1Q16799 776 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 CFAP157Q5JU67 520 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 DCAF15Q66K64 600 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 KCNV2Q8TDN2 545 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 LMBR1Q8WVP7 490 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 PIK3R4Q99570 1358 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 SRGAP1Q7Z6B7 1085 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 NOX5Q96PH1 765 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 TYW5A2RUC4 315 aaKnown RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 PPIP5K2O43314 1243 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 P4HA1P13674 534 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 KRT79Q5XKE5 535 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ANKRD13DQ6ZTN6 518 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 SPAG5Q96R06 1193 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 MCM9Q9NXL9 1143 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 DENND2AQ9ULE3 1009 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ERBB3P21860 1342 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 CASKIN1Q8WXD9 1431 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 PRPF6O94906 941 aaKnown RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 SFPQP23246 707 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERC4-206ENST00000427635 ATICP31939 592 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 GTF2F1P35269 517 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERC4-206ENST00000427635 MRE11P49959 708 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 DLGAP5Q15398 846 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 FAM204AQ9H8W3 233 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 PKD2L1Q9P0L9 805 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ORC3Q9UBD5 711 aaPredicted RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 FANCAO15360 1455 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 PLEKHH1Q9ULM0 1364 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 MCM5P33992 734 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 COPB2P35606 906 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 CCT2P78371 535 aaKnown RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 PLCB3Q01970 1234 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 BIRC3Q13489 604 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 MAP7Q14244 749 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 SLMAPQ14BN4 828 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 MICU3Q86XE3 530 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ACRBPQ8NEB7 543 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ZNF830Q96NB3 372 aaPredicted RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 PAGR1Q9BTK6 254 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 AP5M1Q9H0R1 490 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 BTG4Q9NY30 223 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 NCAPD3P42695 1498 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 CCDC169A6NNP5 214 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ABL1P00519 1130 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 GNA11P29992 359 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ALDH3A1P30838 453 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 UBE3BQ7Z3V4 1068 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 CCDC65Q8IXS2 484 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 SNRKQ9NRH2 765 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 FAM114A2Q9NRY5 505 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 SUGT1Q9Y2Z0 365 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 UHRF1BP1Q6BDS2 1440 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 NOL3O60936 208 aaKnown RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 XPAP23025 273 aaPredicted RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 ATP6V1E1P36543 226 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 MYBPC2Q14324 1141 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 TTC30AQ86WT1 665 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 TEX11Q8IYF3 940 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 EHBP1Q8NDI1 1231 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 ZBED2Q9BTP6 218 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 STMN4Q9H169 189 aaPredicted RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 AFG3L2Q9Y4W6 797 aa6.45□□□□□ -1.38
HERC4-206ENST00000427635 EIF4G3O43432 1585 aaKnown RBP6.45□□□□□ -1.38
HERC4-206ENST00000427635 ESYT2A0FGR8 921 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 CARNS1A5YM72 827 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 SPDYE16A6NNV3 312 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 SPDYE2Q495Y8 402 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 BARGINQ6ZT62 677 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 NME9Q86XW9 330 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 RNF169Q8NCN4 708 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 CCDC94Q9BW85 323 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 KIF9Q9HAQ2 790 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 ZNF662Q6ZS27 426 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 JAKMIP2Q96AA8 810 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 SAP30BPQ9UHR5 308 aaKnown RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 EXOC6BQ9Y2D4 811 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 KIF2AO00139 706 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 ATF7P17544 494 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 CCNA1P78396 465 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 C1orf228Q6PIY5 440 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 SND1Q7KZF4 910 aaKnown RBP eCLIP6.44□□□□□ -1.38
HERC4-206ENST00000427635 LMCD1Q9NZU5 365 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 POTEB2H3BUK9 544 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 OPA1O60313 960 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 TMPOP42166 694 aaKnown RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 FAM98CQ17RN3 349 aaKnown RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 ERCC6LQ2NKX8 1250 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 MAATS1Q7Z4T9 603 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 SUPT6HQ7KZ85 1726 aaKnown RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 PLEKHG3A1L390 1219 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 IRS4O14654 1257 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 ZBTB43O43298 467 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 S100BP04271 92 aaPredicted RBP6.44□□□□□ -1.38
HERC4-206ENST00000427635 SETDB1Q15047 1291 aa6.44□□□□□ -1.38
HERC4-206ENST00000427635 TMEM106CQ9BVX2 250 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms