RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 NYXQ9GZU5 481 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 ELP1O95163 1332 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 CHD4Q14839 1912 aa16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 SBF2Q86WG5 1849 aa16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 PPP1R9BQ96SB3 815 aa16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 SETDB2Q96T68 719 aa16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 SCAND2PQ9GZW5 306 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 BSDC1Q9NW68 430 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 TFIP11Q9UBB9 837 aaKnown RBP16.46■□□□□ 0.23
APOBEC3D-202ENST00000427494 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 NAA16Q6N069 864 aaPredicted RBP16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 TRIM44Q96DX7 344 aaPredicted RBP16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 SPATA32Q96LK8 384 aa16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 ARMT1Q9H993 441 aa16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.22
APOBEC3D-202ENST00000427494 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
APOBEC3D-202ENST00000427494 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
APOBEC3D-202ENST00000427494 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
APOBEC3D-202ENST00000427494 ALX1Q15699 326 aa16.45■□□□□ 0.22
APOBEC3D-202ENST00000427494 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
APOBEC3D-202ENST00000427494 IQSEC3Q9UPP2 1182 aaPredicted RBP16.45■□□□□ 0.22
APOBEC3D-202ENST00000427494 CARMIL3Q8ND23 1372 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 GYG1P46976 350 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 UBE4AQ14139 1066 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 RNF214Q8ND24 703 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 NAPBQ9H115 298 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 EPB41L4AQ9HCS5 686 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 LRP2BPQ9P2M1 347 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 LEO1Q8WVC0 666 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3D-202ENST00000427494 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 NEDD4P46934 1319 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 CYB5R4Q7L1T6 521 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 NLRP3Q96P20 1036 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 HPS5Q9UPZ3 1129 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 TIAM2Q8IVF5 1701 aa16.43■□□□□ 0.22
APOBEC3D-202ENST00000427494 AFF2P51816 1311 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 GOLGA6L4A6NEF3 574 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 B4E1Z4 1266 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 GNAT2P19087 354 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 GSG1L2A8MUP6 293 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 CCDC24Q8N4L8 307 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 ANGEL1Q9UNK9 670 aaKnown RBP16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
APOBEC3D-202ENST00000427494 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 PRKAB2O43741 272 aa16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 FDPSP14324 419 aaKnown RBP16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
APOBEC3D-202ENST00000427494 CPLX1O14810 134 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 CYP7A1P22680 504 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 TDO2P48775 406 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 RPS8P62241 208 aaKnown RBP16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 MYH13Q9UKX3 1938 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 LIG1P18858 919 aa16.4■□□□□ 0.22
APOBEC3D-202ENST00000427494 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
APOBEC3D-202ENST00000427494 NPHP1O15259 732 aa16.39■□□□□ 0.21
APOBEC3D-202ENST00000427494 RFC4P35249 363 aa16.39■□□□□ 0.21
APOBEC3D-202ENST00000427494 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
APOBEC3D-202ENST00000427494 INCENPQ9NQS7 918 aa16.39■□□□□ 0.21
APOBEC3D-202ENST00000427494 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3D-202ENST00000427494 CEBPZQ03701 1054 aaKnown RBP16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 AKNAD1Q5T1N1 836 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 SEPT12Q8IYM1 358 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 FAM84BQ96KN1 310 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 CACNA1SQ13698 1873 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms