RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 VPS53Q5VIR6 699 aa11.45□□□□□ -0.58
HDLBP-211ENST00000425989 ZNF589Q86UQ0 364 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-211ENST00000425989 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
HDLBP-211ENST00000425989 ZSCAN31Q96LW9 406 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-211ENST00000425989 SEC62Q99442 399 aaKnown RBP11.45□□□□□ -0.58
HDLBP-211ENST00000425989 PSMD1Q99460 953 aa11.45□□□□□ -0.58
HDLBP-211ENST00000425989 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
HDLBP-211ENST00000425989 DUOX1Q9NRD9 1551 aa11.45□□□□□ -0.58
HDLBP-211ENST00000425989 CHD4Q14839 1912 aa11.45□□□□□ -0.58
HDLBP-211ENST00000425989 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 MAGEB6P1A0A0J9YX57 407 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 FGAP02671 866 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 PCP11498 1178 aaKnown RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 PDIA4P13667 645 aaKnown RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 PLCG2P16885 1265 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 PPP4CP60510 307 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 R3HDM1Q15032 1099 aaKnown RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 RUFY3Q7L099 469 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 NOL10Q9BSC4 688 aaKnown RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
HDLBP-211ENST00000425989 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
HDLBP-211ENST00000425989 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 M0R2C6 588 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 APPP05067 770 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 KCNA3P22001 575 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 CHRNA5P30532 468 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-211ENST00000425989 TTLL5Q6EMB2 1281 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 BLOC1S2Q6QNY1 142 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
HDLBP-211ENST00000425989 FBXL16Q8N461 479 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
HDLBP-211ENST00000425989 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-211ENST00000425989 ATF5Q9Y2D1 282 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-211ENST00000425989 CYP21A2P08686 494 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 DPEP1P16444 411 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 KLRK1P26718 216 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
HDLBP-211ENST00000425989 MECOMQ03112 1051 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 KIAA2012Q0VF49 1180 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 TRDNQ13061 729 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 DALRD3Q5D0E6 543 aaKnown RBP11.42□□□□□ -0.58
HDLBP-211ENST00000425989 STRIP1Q5VSL9 837 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 CCDC129Q6ZRS4 1044 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 IFNL3Q8IZI9 196 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 CRNKL1Q9BZJ0 848 aaKnown RBP11.42□□□□□ -0.58
HDLBP-211ENST00000425989 PDRG1Q9NUG6 133 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
HDLBP-211ENST00000425989 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-211ENST00000425989 WDR19Q8NEZ3 1342 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 A0A0G2JLW4 131 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 HSP90AA1P07900 732 aaKnown RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 DHX32Q7L7V1 743 aaKnown RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 INTS4Q96HW7 963 aaKnown RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 JAKMIP1Q96N16 626 aaKnown RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 NAPBQ9H115 298 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 CNNM2Q9H8M5 875 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 SPON1Q9HCB6 807 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 SH2B1Q9NRF2 756 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-211ENST00000425989 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 SLC4A4Q9Y6R1 1079 aa11.41□□□□□ -0.58
HDLBP-211ENST00000425989 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 CACNA1SQ13698 1873 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 GSG1L2A8MUP6 293 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 C21orf2O43822 256 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 MBD4O95243 580 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 SLC3A2P08195 630 aaKnown RBP11.4□□□□□ -0.58
HDLBP-211ENST00000425989 RPS6KB1P23443 525 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 GTF2IP78347 998 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 MFSD14BQ5SR56 506 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 HHIPL2Q6UWX4 724 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 NCOA7Q8NI08 942 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 TTC14Q96N46 770 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 RIOK1Q9BRS2 568 aaKnown RBP11.4□□□□□ -0.58
HDLBP-211ENST00000425989 KRT23Q9C075 422 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-211ENST00000425989 SRCAPQ6ZRS2 3230 aa11.4□□□□□ -0.58
HDLBP-211ENST00000425989 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
HDLBP-211ENST00000425989 MYH2Q9UKX2 1941 aa11.39□□□□□ -0.59
HDLBP-211ENST00000425989 E7EWF7 191 aa11.39□□□□□ -0.59
HDLBP-211ENST00000425989 PRDX5P30044 214 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms