RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 CTAGE5O15320 804 aa14.97□□□□□ -0.01
TOP2B-203ENST00000424225 NOP2P46087 812 aaKnown RBP14.97□□□□□ -0.01
TOP2B-203ENST00000424225 KCNJ6P48051 423 aa14.97□□□□□ -0.01
TOP2B-203ENST00000424225 ERC1Q8IUD2 1116 aa14.97□□□□□ -0.01
TOP2B-203ENST00000424225 SPECC1Q5M775 1068 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
TOP2B-203ENST00000424225 TNRQ92752 1358 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 TJP1Q07157 1748 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 SFPQP23246 707 aaKnown RBP eCLIP14.96□□□□□ -0.01
TOP2B-203ENST00000424225 MDM2Q00987 491 aaPredicted RBP14.96□□□□□ -0.01
TOP2B-203ENST00000424225 SMC1AQ14683 1233 aaKnown RBP14.96□□□□□ -0.01
TOP2B-203ENST00000424225 OSBP2Q969R2 916 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 TUBE1Q9UJT0 475 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 HPSEQ9Y251 543 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 PPP2R2CQ9Y2T4 447 aa14.96□□□□□ -0.01
TOP2B-203ENST00000424225 GSDMDP57764 484 aa14.96□□□□□ -0.02
TOP2B-203ENST00000424225 PTPAQ15257 358 aa14.96□□□□□ -0.02
TOP2B-203ENST00000424225 ZNF530Q6P9A1 599 aaPredicted RBP14.96□□□□□ -0.02
TOP2B-203ENST00000424225 VSTM4Q8IW00 320 aa14.96□□□□□ -0.02
TOP2B-203ENST00000424225 SDF4Q9BRK5 362 aa14.96□□□□□ -0.02
TOP2B-203ENST00000424225 TACC3Q9Y6A5 838 aa14.96□□□□□ -0.02
TOP2B-203ENST00000424225 A0A1W2PQ27 194 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 A0A1W2PQ64 194 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 A0A1W2PQD8 194 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 LONRF3Q496Y0 759 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 GPATCH3Q96I76 525 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 MAP3K14Q99558 947 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 ZSWIM4Q9H7M6 989 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 ADAM21Q9UKJ8 722 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 CCDC66A2RUB6 948 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 MAP2K7O14733 419 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 HAND2P61296 217 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 IP6K1Q92551 441 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 MYD88Q99836 296 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 COPRSQ9NQ92 184 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 ATP5J2-PTCD1G3V325 749 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 HIP1O00291 1037 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 GOLIM4O00461 696 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
TOP2B-203ENST00000424225 APTXQ7Z2E3 356 aaKnown RBP14.95□□□□□ -0.02
TOP2B-203ENST00000424225 CHMP4CQ96CF2 233 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 CALCOCO1Q9P1Z2 691 aa14.95□□□□□ -0.02
TOP2B-203ENST00000424225 PRR29P0C7W0 189 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 MYSM1Q5VVJ2 828 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 XAGE3Q8WTP9 111 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 SH3TC1Q8TE82 1336 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 RNF225M0QZC1 329 aaPredicted RBP14.94□□□□□ -0.02
TOP2B-203ENST00000424225 RXRAP19793 462 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 ZNF827Q17R98 1081 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 AKAP4Q5JQC9 854 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 LAMB4A4D0S4 1761 aa14.94□□□□□ -0.02
TOP2B-203ENST00000424225 KDM6AO15550 1401 aaPredicted RBP14.94□□□□□ -0.02
TOP2B-203ENST00000424225 EFCAB8A8MWE9 144 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 SCARF1Q14162 830 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 MUM1L1Q5H9M0 696 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 COPS6Q7L5N1 327 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 PLEKHA4Q9H4M7 779 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 KIF23Q02241 960 aaPredicted RBP14.93□□□□□ -0.02
TOP2B-203ENST00000424225 ZNF594Q96JF6 807 aaPredicted RBP14.93□□□□□ -0.02
TOP2B-203ENST00000424225 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 PKD1L3Q7Z443 1732 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 MYO1CO00159 1063 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 SPTLC2O15270 562 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 LRRC24Q50LG9 513 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 PI16Q6UXB8 463 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 KBTBD3Q8NAB2 608 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 CCDC150Q8NCX0 1101 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
TOP2B-203ENST00000424225 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
TOP2B-203ENST00000424225 KCNA6P17658 529 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 FOXO4P98177 505 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 SHISA4Q96DD7 197 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 SLC3A2P08195 630 aaKnown RBP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 KARSQ15046 597 aaKnown RBP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 LRRFIP1Q32MZ4 808 aaKnown RBP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 ZMYM1Q5SVZ6 1142 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 UBXN4Q92575 508 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 DDX21Q9NR30 783 aaKnown RBP eCLIP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 SOWAHDA6NJG2 315 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 ZSCAN26Q16670 478 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 TMCO3Q6UWJ1 677 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 RAD9BQ6WBX8 426 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
TOP2B-203ENST00000424225 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
TOP2B-203ENST00000424225 PHRF1Q9P1Y6 1649 aaKnown RBP14.91□□□□□ -0.02
TOP2B-203ENST00000424225 UBASH3AP57075 661 aa14.91□□□□□ -0.02
TOP2B-203ENST00000424225 PSME1Q06323 249 aa14.91□□□□□ -0.02
TOP2B-203ENST00000424225 BEND6Q5SZJ8 279 aaPredicted RBP14.91□□□□□ -0.02
TOP2B-203ENST00000424225 C10orf67Q8IYJ2 551 aa14.91□□□□□ -0.02
TOP2B-203ENST00000424225 PUS3Q9BZE2 481 aaKnown RBP14.91□□□□□ -0.02
TOP2B-203ENST00000424225 TEX33O43247 280 aa14.91□□□□□ -0.02
TOP2B-203ENST00000424225 KRT32Q14532 448 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms