RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ORAI2Q96SN7 254 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 TRMT1Q9NXH9 659 aaKnown RBP17.61■□□□□ 0.41
C9orf3-204ENST00000424143 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 A0A1B0GUL7 405 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 PRC1O43663 620 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 SMC2O95347 1197 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 MYH7P12883 1935 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
C9orf3-204ENST00000424143 ELF2Q15723 593 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 OSBP2Q969R2 916 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
C9orf3-204ENST00000424143 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-204ENST00000424143 ATRNO75882 1429 aa17.6■□□□□ 0.41
C9orf3-204ENST00000424143 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
C9orf3-204ENST00000424143 FOXP2O15409 715 aa17.6■□□□□ 0.41
C9orf3-204ENST00000424143 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
C9orf3-204ENST00000424143 PFKFB1P16118 471 aa17.6■□□□□ 0.41
C9orf3-204ENST00000424143 MYL5Q02045 173 aa17.6■□□□□ 0.41
C9orf3-204ENST00000424143 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
C9orf3-204ENST00000424143 ZMYM6O95789 1325 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 KLF18A0A0U1RQI7 1052 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 CYP27B1O15528 508 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 ZSCAN12O43309 604 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 TIMM10P62072 90 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 GUCY1B3Q02153 619 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 VSTM4Q8IW00 320 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 HSD3B7Q9H2F3 369 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 ARGLU1Q9NWB6 273 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-204ENST00000424143 PAPPAQ13219 1627 aa17.59■□□□□ 0.41
C9orf3-204ENST00000424143 CPLX1O14810 134 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 CUTAO60888 179 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 FGAP02671 866 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 CABP4P57796 275 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 CT47A1Q5JQC4 288 aaPredicted RBP17.58■□□□□ 0.41
C9orf3-204ENST00000424143 RESP18Q5W5W9 173 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 CPLX2Q6PUV4 134 aaKnown RBP17.58■□□□□ 0.41
C9orf3-204ENST00000424143 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 DNAI1Q9UI46 699 aa17.58■□□□□ 0.41
C9orf3-204ENST00000424143 STK36Q9NRP7 1315 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 GOLGA8BA8MQT2 603 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 NBPF26B4DH59 902 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 ZRANB2O95218 330 aaKnown RBP eCLIP17.58■□□□□ 0.4
C9orf3-204ENST00000424143 SYKP43405 635 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 ANTXR2P58335 489 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 PTPAQ15257 358 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 NBPF14Q5TI25 921 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 NBPF10Q6P3W6 841 aaKnown RBP17.58■□□□□ 0.4
C9orf3-204ENST00000424143 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 RALYLQ86SE5 291 aaKnown RBP17.58■□□□□ 0.4
C9orf3-204ENST00000424143 NBPF15Q8N660 670 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 ZNF446Q9NWS9 450 aa17.58■□□□□ 0.4
C9orf3-204ENST00000424143 EFCAB8A8MWE9 144 aa17.57■□□□□ 0.4
C9orf3-204ENST00000424143 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
C9orf3-204ENST00000424143 ARHGAP6O43182 974 aa17.57■□□□□ 0.4
C9orf3-204ENST00000424143 SYT10Q6XYQ8 523 aa17.57■□□□□ 0.4
C9orf3-204ENST00000424143 ISCA1Q9BUE6 129 aa17.57■□□□□ 0.4
C9orf3-204ENST00000424143 NID2Q14112 1375 aa17.56■□□□□ 0.4
C9orf3-204ENST00000424143 FOSBP53539 338 aa17.56■□□□□ 0.4
C9orf3-204ENST00000424143 TBX2Q13207 712 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-204ENST00000424143 TTLL5Q6EMB2 1281 aa17.56■□□□□ 0.4
C9orf3-204ENST00000424143 REXO1L1PQ8IX06 675 aa17.56■□□□□ 0.4
C9orf3-204ENST00000424143 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
C9orf3-204ENST00000424143 HOOK1Q9UJC3 728 aaKnown RBP17.56■□□□□ 0.4
C9orf3-204ENST00000424143 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 ZNF213O14771 459 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-204ENST00000424143 POLR3DP05423 398 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-204ENST00000424143 UBASH3AP57075 661 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 ALX1Q15699 326 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 MAP3K14Q99558 947 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.4
C9orf3-204ENST00000424143 C19orf44Q9H6X5 657 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 NAP1L2Q9ULW6 460 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-204ENST00000424143 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
C9orf3-204ENST00000424143 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
C9orf3-204ENST00000424143 TADA3O75528 432 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 ERCC6LQ2NKX8 1250 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 NT5DC1Q5TFE4 455 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 UBXN6Q9BZV1 441 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 KCPQ6ZWJ8 1503 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 DCCP43146 1447 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 A0A087WWV3 80 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 CSF1RP07333 972 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 CLCN6P51797 869 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 TUBB4BP68371 445 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 TRDNQ13061 729 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-204ENST00000424143 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 TRIML1Q8N9V2 468 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 UBXN4Q92575 508 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
C9orf3-204ENST00000424143 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms